ACOC_0001130401 (Angiostrongylus costaricensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ACOC_0001130401 T151927_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.783 0.884
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0001130401-mRNA-1 C2H2 ZF 74 96
ACOC_0001130401-mRNA-1 C2H2 ZF 102 124
ACOC_0001130401-mRNA-1 C2H2 ZF 130 152

Links

Other C2H2 ZF family TFs
Other Angiostrongylus costaricensis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_03267 Wuchereria bancrofti WUBG_03267 N 0.000
Bm5193 Brugia malayi Bm5193 N 0.000
WBGene00240603 Onchocerca volvulus WBGene00240603 N 0.000
BTMF_0001049501 Brugia timori BTMF_0001049501 N 0.000
nAv.1.0.1.g03519 Acanthocheilonema viteae nAv.1.0.1.g03519 N 0.000
nDi.2.2.2.g04995 Dirofilaria immitis nDi.2.2.2.g04995 N 0.000
nLs.2.1.2.g08650 Litomosoides sigmodontis nLs.2.1.2.g08650 N 0.000
nOo.2.0.1.g00989 Onchocerca ochengi nOo.2.0.1.g00989 N 0.000
OFLC_0001389501 Onchocerca flexuosa OFLC_0001389501 N 0.000
TCLT_0000614701 Thelazia callipaeda TCLT_0000614701 N 0.000