odd-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003846 T131565_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in intestine and tail. Orthologous to human OSR2 (odd-skipped related transciption factor 2) and OSR1 (odd-skipped related transcription factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00		 Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00618_2.00 C2H2 ZF 51 73
M00618_2.00 C2H2 ZF 79 101
M00618_2.00 C2H2 ZF 107 129

DNA Binding Domains

Protein ID Domain From To Sequence
C34H3.2 C2H2 ZF 124 146
C34H3.2 C2H2 ZF 152 174
C34H3.2 C2H2 ZF 180 202

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA04579 Caenorhabditis japonica CJA04579 I 0.823
CBN15373 Caenorhabditis brenneri CBN15373 I 0.823
CRE00192 Caenorhabditis remanei CRE00192 I 0.820
CBG14844 Caenorhabditis briggsae CBG14844 I 0.820
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I 0.794
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I 0.790
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I 0.790
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I 0.790
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I 0.790
LotgiG130661 Lottia gigantea LotgiG130661 I 0.787
NECAME_08408 Necator americanus NECAME_08408 I 0.786
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I 0.783
HCOI00889400 Haemonchus contortus HCOI00889400 I 0.783
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I 0.783
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I 0.783
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I 0.774
LotgiG102775 Lottia gigantea LotgiG102775 I 0.774
Bm9236 Brugia malayi Bm9236 I 0.771
BTMF_0000075201 Brugia timori BTMF_0000075201 I 0.771
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I 0.770
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I 0.770
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I 0.770
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.770
osr2.L Xenopus laevis XB-GENE-864802 I 0.770
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I 0.770
DME_0000745901 Dracunculus medinensis DME_0000745901 I 0.770
nDi.2.2.2.g05871 Dirofilaria immitis nDi.2.2.2.g05871 I 0.770
osr2.S Xenopus laevis XB-GENE-6254720 I 0.770
Ogr10172 Ophisaurus gracilis Ogr10172 I 0.770
Gfo_R006005 Geospiza fortis Gfo_R006005 I 0.770
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I 0.770
osr2 Gasterosteus aculeatus ENSGACG00000003524 I 0.770
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I 0.770
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I 0.770
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I 0.770
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I 0.770
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I 0.770
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I 0.770
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I 0.770
CGI_10012022 Crassostrea gigas CGI_10012022 I 0.770
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I 0.770
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I 0.770
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I 0.770
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I 0.770
OSR2 Homo sapiens ENSG00000164920 D 0.770
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I 0.770
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.770
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I 0.770
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I 0.770
OSR2 Sus scrofa ENSSSCG00000006073 I 0.770
Osr2 Rattus norvegicus ENSRNOG00000011136 I 0.770
Osr2 Mus musculus ENSMUSG00000022330 D 0.770
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I 0.770
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I 0.770
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I 0.767
TCNE_0000229401 Toxocara canis TCNE_0000229401 I 0.767
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I 0.767
LOAG_00579 Loa loa LOAG_00579 I 0.767
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I 0.767
WBGene00239217 Onchocerca volvulus WBGene00239217 I 0.767
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I 0.767
ASU_07002 Ascaris suum ASU_07002 I 0.767
scaffold395-EXSNAP2012.4 Pristionchus exspectatus scaffold395-EXSNAP2012.4 I 0.766
Ppa-odd-1 Pristionchus pacificus PPA09938 I 0.766
osr2 Danio rerio ENSDARG00000038006 I 0.766
SMUV_0000818001 Syphacia muris SMUV_0000818001 I 0.763
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I 0.763
CRE25083 Caenorhabditis remanei CRE25083 I 0.761
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I 0.760