CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002547001
(
Gongylonema pulchrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPUH_0002547001
T153726_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002547001-mRNA-1
C2H2 ZF
8
28
VCVDCNRTLSSDYSLKRHRST
Links
Other
C2H2 ZF
family TFs
Other
Gongylonema pulchrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000008630
Astyanax mexicanus
ENSAMXG00000008630
N
olig4
Danio rerio
ENSDARG00000052610
N
olig4
Gasterosteus aculeatus
ENSGACG00000007415
N
ENSGMOG00000019211
Gadus morhua
ENSGMOG00000019211
N
ENSLOCG00000018275
Lepisosteus oculatus
ENSLOCG00000018275
N
olig4
Oryzias latipes
ENSORLG00000017556
N
ENSPFOG00000020418
Poecilia formosa
ENSPFOG00000020418
N
olig4
Tetraodon nigroviridis
ENSTNIG00000008922
N
olig4
Takifugu rubripes
ENSTRUG00000012125
N
ENSXMAG00000018752
Xiphophorus maculatus
ENSXMAG00000018752
N
olig4
Xenopus tropicalis
XB-GENE-484736
N