CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
olig4
(
Xenopus tropicalis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
XB-GENE-484736
T051793_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI61514
bHLH
59
113
LRLKVNSRERQRMHDLNQAMDGLREVMPYSHGPSVRKLSKISTLILARNYIVMLS
CAJ82367
bHLH
59
113
LRLKVNSRERQRMHDLNQAMDGLREVMPYSHGPSVRKLSKISTLILARNYIVMLS
Links
Other
bHLH
family TFs
Other
Xenopus tropicalis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000008239
Oreochromis niloticus
ENSONIG00000008239
N
0.914
olig4
Oryzias latipes
ENSORLG00000017556
N
0.914
ENSPFOG00000020418
Poecilia formosa
ENSPFOG00000020418
N
0.914
ENSXMAG00000018752
Xiphophorus maculatus
ENSXMAG00000018752
N
0.914
ENSAMXG00000008630
Astyanax mexicanus
ENSAMXG00000008630
N
0.867
olig4
Danio rerio
ENSDARG00000052610
N
0.867
olig4
Gasterosteus aculeatus
ENSGACG00000007415
N
0.867
ENSGMOG00000019211
Gadus morhua
ENSGMOG00000019211
N
0.867
ENSLOCG00000018275
Lepisosteus oculatus
ENSLOCG00000018275
N
0.867
olig4
Tetraodon nigroviridis
ENSTNIG00000008922
N
0.867
olig4
Takifugu rubripes
ENSTRUG00000012125
N
0.867