HCOI00400800 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00400800 T153801_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
B0310.2
M00638_2.00 		Caenorhabditis elegans
NNDNCCTCVN
NBGAGGNHNN		 PBM
Narasimhan et al.(2015)
pTH10823 		0.816 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00400800.t1 C2H2 ZF 322 346
HCOI00400800.t1 C2H2 ZF 352 374

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
B0310.2 Caenorhabditis elegans WBGene00015138 D 0.816
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I 0.774
L893_g22395 Steinernema glaseri L893_g22395 I 0.768
L898_g26631 Steinernema monticolum L898_g26631 I 0.768
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I 0.763
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I 0.763
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I 0.827
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I 0.767
nOo.2.0.1.g11672 Onchocerca ochengi nOo.2.0.1.g11672 I 0.767
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I 0.827
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I 0.779
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I 0.768
L889_g30058 Steinernema feltiae L889_g30058 I 0.768
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I 0.774
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I 0.779
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I 0.779
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I 0.779
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I 0.827
TCNE_0001118001 Toxocara canis TCNE_0001118001 I 0.773
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I 0.827
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I 0.774
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I 0.774
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I 0.827
Bm10487 Brugia malayi Bm10487 I 0.767
CBG08158 Caenorhabditis briggsae CBG08158 I 0.816
CBN30348 Caenorhabditis brenneri CBN30348 I 0.810
CJA07808 Caenorhabditis japonica CJA07808 I 0.792
CRE17142 Caenorhabditis remanei CRE17142 I 0.816
EFV53318 Trichinella spiralis EFV53318 I 0.769
WBGene00240779 Onchocerca volvulus WBGene00240779 I 0.767
Minc12888 Meloidogyne incognita Minc12888 I 0.763
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I 0.827
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I 0.773
L892_g1322 Steinernema scapterisci L892_g1322 I 0.768
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I 0.827
ASU_06106 Ascaris suum ASU_06106 I 0.773
BTMF_0001757301 Brugia timori BTMF_0001757301 I 0.767
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I 0.768
D917_07770 Trichinella nativa D917_07770 I 0.774
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I 0.827
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I 0.827
L596_g12501 Steinernema carpocapsae L596_g12501 I 0.768
WUBG_01471 Wuchereria bancrofti WUBG_01471 I 0.767