CBN30348 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN30348 T083089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
B0310.2
M00638_2.00 		Caenorhabditis elegans
NNDNCCTCVN
NBGAGGNHNN		 PBM
Narasimhan et al.(2015)
pTH10823 		0.821 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN30348 C2H2 ZF 345 369
CBN30348 C2H2 ZF 375 397

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG08158 Caenorhabditis briggsae CBG08158 I 0.821
CRE17142 Caenorhabditis remanei CRE17142 I 0.821
B0310.2 Caenorhabditis elegans WBGene00015138 D 0.821
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I 0.810
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I 0.810
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I 0.810
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I 0.810
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I 0.810
HCOI00400800 Haemonchus contortus HCOI00400800 I 0.810
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I 0.810
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I 0.810
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I 0.810
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I 0.810
CJA07808 Caenorhabditis japonica CJA07808 I 0.797
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I 0.768
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I 0.767
WUBG_01471 Wuchereria bancrofti WUBG_01471 I 0.762
Bm10487 Brugia malayi Bm10487 I 0.762
WBGene00240779 Onchocerca volvulus WBGene00240779 I 0.762
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I 0.762
ASU_06106 Ascaris suum ASU_06106 I 0.762
BTMF_0001757301 Brugia timori BTMF_0001757301 I 0.762
D917_07770 Trichinella nativa D917_07770 I 0.762
L596_g12501 Steinernema carpocapsae L596_g12501 I 0.762
L889_g30058 Steinernema feltiae L889_g30058 I 0.762
L892_g1322 Steinernema scapterisci L892_g1322 I 0.762
L893_g22395 Steinernema glaseri L893_g22395 I 0.762
L898_g26631 Steinernema monticolum L898_g26631 I 0.762
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I 0.762
nOo.2.0.1.g11672 Onchocerca ochengi nOo.2.0.1.g11672 I 0.762
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I 0.762
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I 0.762
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I 0.762
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I 0.762
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I 0.762
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I 0.762
TCNE_0001118001 Toxocara canis TCNE_0001118001 I 0.762
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I 0.762
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I 0.762
EFV53318 Trichinella spiralis EFV53318 I 0.757
Minc12888 Meloidogyne incognita Minc12888 I 0.757
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I 0.757
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I 0.757