CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g25021
(
Steinernema scapterisci
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L892_g25021
T154579_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g25021.t1
C2H2 ZF
151
173
FACPTCHKQYCRKSTLKAHMRQH
L892_g25021.t1
C2H2 ZF
179
201
FTCQVCGKCFSQAANLTAHKRVH
L892_g25021.t1
C2H2 ZF
207
229
FECSICLRPFSQSSSLVTHKRTH
L892_g25021.t1
C2H2 ZF
235
257
YPCPHCDKAFTDSSTLTKHLRTH
L892_g25021.t1
C2H2 ZF
263
285
YGCHLCMMRFTQSGNLHRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema scapterisci
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc07984
Meloidogyne incognita
Minc07984
N
0.763
ASIM_0001280301
Anisakis simplex
ASIM_0001280301
N
0.776
BXY_0695300
Bursaphelenchus xylophilus
BXY_0695300
N
0.760
L596_g10849
Steinernema carpocapsae
L596_g10849
N
0.827
L889_g25430
Steinernema feltiae
L889_g25430
N
0.813
PTRK_0000715400
Parastrongyloides trichosuri
PTRK_0000715400
N
0.769
RSKR_0000733400
Rhabditophanes kr3021
RSKR_0000733400
N
0.789
SMUV_0000662601
Syphacia muris
SMUV_0000662601
N
0.788
SPAL_0001681000
Strongyloides papillosus
SPAL_0001681000
N
0.766
SSTP_0000180200
Strongyloides stercoralis
SSTP_0000180200
N
0.769
SVE_1807000
Strongyloides venezuelensis
SVE_1807000
N
0.766