CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000662601
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000662601
T156437_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000662601-mRNA-1
C2H2 ZF
174
196
HACPTCHKQYCRKSTLKAHLKQH
SMUV_0000662601-mRNA-1
C2H2 ZF
202
224
FTCQVCGKSFSQAANLTAHKRVH
SMUV_0000662601-mRNA-1
C2H2 ZF
230
252
FSCPICLRPFSQSSSLVTHKRTH
SMUV_0000662601-mRNA-1
C2H2 ZF
258
280
YSCTHCNKAFTDSSTLTKHLRTH
SMUV_0000662601-mRNA-1
C2H2 ZF
286
308
YNCQLCLMRFTQSGNLHRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001280301
Anisakis simplex
ASIM_0001280301
N
0.790
L596_g10849
Steinernema carpocapsae
L596_g10849
N
0.788
L892_g25021
Steinernema scapterisci
L892_g25021
N
0.788
L889_g25430
Steinernema feltiae
L889_g25430
N
0.778
PTRK_0000715400
Parastrongyloides trichosuri
PTRK_0000715400
N
0.773
SSTP_0000180200
Strongyloides stercoralis
SSTP_0000180200
N
0.773
RSKR_0000733400
Rhabditophanes kr3021
RSKR_0000733400
N
0.771
SPAL_0001681000
Strongyloides papillosus
SPAL_0001681000
N
0.770
SVE_1807000
Strongyloides venezuelensis
SVE_1807000
N
0.770
Minc07984
Meloidogyne incognita
Minc07984
N
0.767