NBR_0000990501 (Nippostrongylus brasiliensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NBR_0000990501 T155089_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.794 0.913
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.767 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000990501-mRNA-1 C2H2 ZF 126 148
NBR_0000990501-mRNA-1 C2H2 ZF 154 176
NBR_0000990501-mRNA-1 C2H2 ZF 182 204

Links

Other C2H2 ZF family TFs
Other Nippostrongylus brasiliensis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pros-1 Caenorhabditis elegans WBGene00000448 D 0.000
L892_g25141 Steinernema scapterisci L892_g25141 I 0.000
PHUM334550 Pediculus humanus PHUM334550 I 0.000
ASU_00242 Ascaris suum ASU_00242 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DME_0000841401 Dracunculus medinensis DME_0000841401 I 0.000
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I 0.000
HCOI01824000 Haemonchus contortus HCOI01824000 I 0.000
L596_g9976 Steinernema carpocapsae L596_g9976 I 0.000
L889_g22574 Steinernema feltiae L889_g22574 I 0.000
WBGene00244521 Onchocerca volvulus WBGene00244521 I 0.000
L893_g28279 Steinernema glaseri L893_g28279 I 0.000
L898_g8569 Steinernema monticolum L898_g8569 I 0.000
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
NBR_0000066801 Nippostrongylus brasiliensis NBR_0000066801 I 0.000
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I 0.000
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I 0.000
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I 0.000
SVE_0442300 Strongyloides venezuelensis SVE_0442300 I 0.000
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I 0.000
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I 0.000
EFV53283 Trichinella spiralis EFV53283 I 0.000
DAPPUDRAFT_290533 Daphnia pulex DAPPUDRAFT_290533 I 0.000
CJA12444 Caenorhabditis japonica CJA12444 I 0.000
CBN10125 Caenorhabditis brenneri CBN10125 I 0.000
CBG22984 Caenorhabditis briggsae CBG22984 I 0.000
Bm5024 Brugia malayi Bm5024 I 0.000
csin108622 Clonorchis sinensis csin108622 N 0.000
CapteG2449 Capitella teleta CapteG2449 N 0.000
GG18089 Drosophila erecta FBgn0110306 N 0.000
GF16857 Drosophila ananassae FBgn0093877 N 0.000
ECANG7_03959 Echinococcus canadensis ECANG7_03959 N 0.000
ECPE_0000538001 Echinostoma caproni ECPE_0000538001 N 0.000
EmuJ_000703400 Echinococcus multilocularis EmuJ_000703400 N 0.000
GA14403 Drosophila pseudoobscura FBgn0074431 N 0.000
pros Drosophila virilis FBgn0028753 N 0.000
pros Drosophila simulans FBgn0025030 N 0.000
pros Drosophila melanogaster FBgn0004595 N 0.000
GH21437 Drosophila grimshawi FBgn0128899 N 0.000
TsM_000259000 Taenia solium TsM_000259000 N 0.000
T265_07444 Opisthorchis viverrini T265_07444 N 0.000
CGI_10022026 Crassostrea gigas CGI_10022026 N 0.000
AGAP004052 Anopheles gambiae AGAP004052 N 0.000
nRc.2.0.1.g04054 Romanomermis culicivorax nRc.2.0.1.g04054 N 0.000
GI22696 Drosophila mojavensis FBgn0145423 N 0.000
GE26090 Drosophila yakuba FBgn0243130 N 0.000
ISCW008733 Ixodes scapularis ISCW008733 N 0.000
KGM_10139 Danaus plexippus KGM_10139 N 0.000
LotgiG183824 Lottia gigantea LotgiG183824 N 0.000
NV15108 Nasonia vitripennis NV15108 N 0.000
GM23939 Drosophila sechellia FBgn0178804 N 0.000
RPRC009271 Rhodnius prolixus RPRC009271 N 0.000
SMAR007154 Strigamia maritima SMAR007154 N 0.000
Smp_162760 Schistosoma mansoni Smp_162760 N 0.000
TC010596 Tribolium castaneum TC010596 N 0.000
tetur02g12740 Tetranychus urticae tetur02g12740 N 0.000
GK11290 Drosophila willistoni FBgn0213301 N 0.000
AAEL002769 Aedes aegypti AAEL002769 N 0.000
CLEC000910 Cimex lectularius CLEC000910 N 0.000
LDEC004085 Leptinotarsa decemlineata LDEC004085 N 0.000
AARA009758 Anopheles arabiensis AARA009758 N 0.000
AATE019368 Anopheles atroparvus AATE019368 N 0.000
ACOM033416 Anopheles coluzzii ACOM033416 N 0.000
AFAF012033 Anopheles farauti AFAF012033 N 0.000
AMEC020934 Anopheles melas AMEC020934 N 0.000
AMEM000031 Anopheles merus AMEM000031 N 0.000
MDOA008728 Musca domestica MDOA008728 N 0.000