CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0002100701
(
Protopolystoma xenopodis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PXEA_0002100701
T155830_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0002100701-mRNA-1
C2H2 ZF
409
431
FTCRVCAKAYTQASALKMHIRTH
PXEA_0002100701-mRNA-1
C2H2 ZF
435
457
CRCERCGKSFSRKWLLKGHERTH
PXEA_0002100701-mRNA-1
C2H2 ZF
463
485
YHCQLCSRSFADRSNLRAHMQTH
PXEA_0002100701-mRNA-1
C2H2 ZF
491
514
YRCPTCPRSFSRMGLLNKHLSHTH
Links
Other
C2H2 ZF
family TFs
Other
Protopolystoma xenopodis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_165420
Schistosoma mansoni
Smp_165420
N
0.762
A_02434
Schistosoma haematobium
A_02434
N
0.762
csin104700
Clonorchis sinensis
csin104700
N
0.759
ECPE_0001462501
Echinostoma caproni
ECPE_0001462501
N
0.765
SCUD_0000351101
Schistosoma curassoni
SCUD_0000351101
N
0.762
SMRZ_0000860401
Schistosoma margrebowiei
SMRZ_0000860401
N
0.762
SMTD_0000828401
Schistosoma mattheei
SMTD_0000828401
N
0.762
SROB_0000306401
Schistosoma rodhaini
SROB_0000306401
N
0.762
T265_11567
Opisthorchis viverrini
T265_11567
N
0.759
TRE_0000447301
Trichobilharzia regenti
TRE_0000447301
N
0.759