CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000447301
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000447301
T157971_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000447301-mRNA-1
C2H2 ZF
496
518
YACKLCSKVYSQASALKMHVRTH
TRE_0000447301-mRNA-1
C2H2 ZF
522
544
CRCSHCGKSFSRKWLLKGHERTH
TRE_0000447301-mRNA-1
C2H2 ZF
550
572
YSCNICGRSFADRSNLRAHMQTH
TRE_0000447301-mRNA-1
C2H2 ZF
578
602
YSCAYCPRSFSRMGLLNKHILQCNH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SROB_0000306401
Schistosoma rodhaini
SROB_0000306401
N
0.814
Smp_165420
Schistosoma mansoni
Smp_165420
N
0.811
A_02434
Schistosoma haematobium
A_02434
N
0.809
SCUD_0000351101
Schistosoma curassoni
SCUD_0000351101
N
0.809
SMRZ_0000860401
Schistosoma margrebowiei
SMRZ_0000860401
N
0.809
SMTD_0000828401
Schistosoma mattheei
SMTD_0000828401
N
0.809
ECPE_0001462501
Echinostoma caproni
ECPE_0001462501
N
0.790
csin104700
Clonorchis sinensis
csin104700
N
0.780
T265_11567
Opisthorchis viverrini
T265_11567
N
0.780
PXEA_0002100701
Protopolystoma xenopodis
PXEA_0002100701
N
0.759