RSKR_0000656700 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000656700 T155899_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.787 0.837
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.787 0.837
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.787 0.837
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000656700.1 C2H2 ZF 209 231
RSKR_0000656700.1 C2H2 ZF 237 259
RSKR_0000656700.1 C2H2 ZF 265 287
RSKR_0000656700.1 C2H2 ZF 293 316

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_170444 Baudoinia compniacensis BAUCODRAFT_170444 N
CSUB01_04340 Colletotrichum sublineola CSUB01_04340 N
NechaG85498 Fusarium solani NechaG85498 N