CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001131501
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001131501
T156933_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001131501-mRNA-1
C2H2 ZF
1263
1285
HQCPYCPKSCERKDNLQAHIRTH
SROB_0001131501-mRNA-1
C2H2 ZF
1291
1313
YPCRYCPKAFPQKDHLRAHIRTH
SROB_0001131501-mRNA-1
C2H2 ZF
1319
1341
YRCPQCLKAFAQLGNLHRHVKTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG103842
Fusarium solani
NechaG103842
N
SMAC_05082
Sordaria macrospora
SMAC_05082
N
TRIATDRAFT_214873
Trichoderma atroviride
TRIATDRAFT_214873
N
TRIVIDRAFT_180483
Trichoderma virens
TRIVIDRAFT_180483
N
X797_004656
Metarhizium robertsii
X797_004656
N
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
Nectria haematococca
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
N