CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
T389686_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
Zinc cluster
5
46
RACDACHKRKIQCDSTSSKTPCNWCEHHGLACTFNRIRGRKK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG103842
Fusarium solani
NechaG103842
N
0.683
FVEG_02409
Fusarium verticillioides
FVEG_02409
N
0.651
SMAC_05082
Sordaria macrospora
SMAC_05082
N
0.576
X797_004656
Metarhizium robertsii
X797_004656
N
0.557
TRIATDRAFT_214873
Trichoderma atroviride
TRIATDRAFT_214873
N
0.544
TRIVIDRAFT_180483
Trichoderma virens
TRIVIDRAFT_180483
N
0.544