SROB_0001927701 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0001927701 T156969_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
egrh-1
M00622_2.00 		Caenorhabditis elegans
CSCCCMCR
YGKGGGSG		 PBM
Narasimhan et al.(2015)
pTH9317 		0.780 0.768
sr
M06072_2.00 		Drosophila melanogaster
HVMCGCCCMCVYMH
DKRBGKGGGCGKBD		 B1H
Zhu et al.(2011)
sr_SANGER_5_FBgn0003499 		0.764 0.739
sr
M06073_2.00 		Drosophila melanogaster
NNMCRCCCMCVHNN
NNDBGKGGGYGKNN		 B1H
Zhu et al.(2011)
sr_SOLEXA_5_FBgn0003499 		0.764 0.739
Egr1
M01864_2.00 		Mus musculus
CCCMCGYNN
NNRCGKGGG		 PBM
Weirauch et al.(2014)
pTH5337 		0.761 0.768
Egr1
M00375_2.00 		Mus musculus
NCCYMCDNN
NNHGKRGGN		 PBM
Berger et al.(2006)
Zif268 		0.761 0.768
EGR1
M02883_2.00 		Homo sapiens
NMCGCCCMCGCANN
NNTGCGKGGGCGKN		 SELEX
Jolma et al.(2013)
EGR1_1 		0.761 0.768
EGR1
M02884_2.00 		Homo sapiens
HMCGCCCACGCAHW
WDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
EGR1_2 		0.761 0.768
Egr1
M02932_2.00 		Mus musculus
HHMCGCCCMCBCAHHH
DDDTGVGKGGGCGKDD		 SELEX
Jolma et al.(2013)
Egr1_1 		0.761 0.768
EGR1
M04437_2.00 		Homo sapiens
NNCRCCCMCRCNN
NNGYGKGGGYGNN		 SELEX
Yin et al.(2017)
EGR1_eDBD_HT-SELEX 		0.761 0.768
Egr1
M05860_2.00 		Mus musculus
NNMCRCCCMCGCN
NGCGKGGGYGKNN		 SMiLE-seq
Isakova et al.(2017)
EGR1 		0.761 0.768
EGR1
M07927_2.00 		Homo sapiens
NVBNNNNBCCGCCCMCGCNB
VNGCGKGGGCGGVNNNNVBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_EGR1_HudsonAlpha 		0.761 0.768
EGR1
M07928_2.00 		Homo sapiens
BNCCGCCCMCGCNBB
VVNGCGKGGGCGGNV		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_EGR1_HudsonAlpha 		0.761 0.768
EGR1
M07929_2.00 		Homo sapiens
NNNNNNBNNCCRCCCMCGCN
NGCGKGGGYGGNNVNNNNNN		 ChIP-seq
Gerstein et al.(2012)
K562_EGR1_HudsonAlpha 		0.761 0.768
EGR1
M08882_2.00 		Homo sapiens
BHNCCDCCCMCDCHBNB
VNVDGHGKGGGHGGNDV		 Misc
Kulakovskiy et al.(2013)
EGR1_HUMAN.H11MO.0.A 		0.761 0.768
Egr1
M08996_2.00 		Mus musculus
YYCCRCCCMCGCNB
VNGCGKGGGYGGRR		 Misc
Kulakovskiy et al.(2013)
EGR1_MOUSE.H11MO.0.A 		0.761 0.768
EGR1
M09506_2.00 		Homo sapiens
CRCCCMCRCA
TGYGKGGGYG		 Misc
Heinz et al.(2010)
K562-Egr1_GSE32465 		0.761 0.768
EGR1
M10188_2.00 		Homo sapiens
MCGCCYACGCAW
WTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR1_01 		0.761 0.768
EGR1
M10189_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_02 		0.761 0.768
EGR1
M10190_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_09 		0.761 0.768
EGR1
M10191_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_11 		0.761 0.768
EGR1
M10192_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_12 		0.761 0.768
EGR1
M10193_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_13 		0.761 0.768
EGR1
M10194_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_15 		0.761 0.768
EGR1
M10195_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q3 		0.761 0.768
EGR1
M10196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q6 		0.761 0.768
EGR1
M04438_2.00 		Homo sapiens
NHCDCCCMCNYNN
NNRNGKGGGHGDN		 SELEX
Yin et al.(2017)
EGR1_eDBD_Methyl-HT-SELEX 		0.761 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001927701-mRNA-1 C2H2 ZF 380 402
SROB_0001927701-mRNA-1 C2H2 ZF 408 430
SROB_0001927701-mRNA-1 C2H2 ZF 436 458

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EGR1 Homo sapiens ENSG00000120738 D 0.761
Egr1 Mus musculus ENSMUSG00000038418 D 0.761
sr Drosophila melanogaster FBgn0003499 D 0.764
CpipJ_CPIJ010041 Culex pipiens CpipJ_CPIJ010041 I 0.764
WUBG_00846 Wuchereria bancrofti WUBG_00846 I 0.780
ACEP23410 Atta cephalotes ACEP23410 I 0.760
ACYPI000882 Acyrthosiphon pisum ACYPI000882 I 0.760
AGAP002773 Anopheles gambiae AGAP002773 I 0.764
Aqu1.227156 Amphimedon queenslandica Aqu1.227156 I 0.760
BGIBMGA011498 Bombyx mori BGIBMGA011498 I 0.760
Bm2429 Brugia malayi Bm2429 I 0.780
CapteG179417 Capitella teleta CapteG179417 I 0.769
CBG07600 Caenorhabditis briggsae CBG07600 I 0.780
CBG15303 Caenorhabditis briggsae CBG15303 I 0.776
CBN14580 Caenorhabditis brenneri CBN14580 I 0.780
CGI_10022978 Crassostrea gigas CGI_10022978 I 0.764
CJA07724 Caenorhabditis japonica CJA07724 I 0.780
CPIJ010041 Culex quinquefasciatus CPIJ010041 I 0.764
CRE15316 Caenorhabditis remanei CRE15316 I 0.780
DAPPUDRAFT_96734 Daphnia pulex DAPPUDRAFT_96734 I 0.764
ENSAMEG00000016544 Ailuropoda melanoleuca ENSAMEG00000016544 I 0.761
ENSAMXG00000007269 Astyanax mexicanus ENSAMXG00000007269 I 0.756
ENSAPLG00000002018 Anas platyrhynchos ENSAPLG00000002018 I 0.761
EGR1 Bos taurus ENSBTAG00000010069 I 0.761
EGR1 Canis familiaris ENSCAFG00000001254 I 0.761
EGR1 Callithrix jacchus ENSCJAG00000006771 I 0.761
EGR1 Cavia porcellus ENSCPOG00000027141 I 0.761
ENSCSAG00000013111 Chlorocebus sabaeus ENSCSAG00000013111 I 0.761
egr3 Danio rerio ENSDARG00000089156 I 0.756
EGR1 Dasypus novemcinctus ENSDNOG00000034151 I 0.761
EGR1 Equus caballus ENSECAG00000014338 I 0.761
EGR1 Echinops telfairi ENSETEG00000017735 I 0.761
ENSFALG00000003413 Ficedula albicollis ENSFALG00000003413 I 0.761
EGR1 Felis catus ENSFCAG00000025420 I 0.761
egr3 Gasterosteus aculeatus ENSGACG00000010820 I 0.756
EGR1 Gallus gallus ENSGALG00000007669 I 0.761
EGR1 Gorilla gorilla ENSGGOG00000008122 I 0.761
ENSGMOG00000005595 Gadus morhua ENSGMOG00000005595 I 0.756
ENSLACG00000005149 Latimeria chalumnae ENSLACG00000005149 I 0.761
EGR1 Loxodonta africana ENSLAFG00000016505 I 0.761
ENSLOCG00000014936 Lepisosteus oculatus ENSLOCG00000014936 I 0.756
ENSMEUG00000012133 Macropus eugenii ENSMEUG00000012133 I 0.761
EGR1 Meleagris gallopavo ENSMGAG00000009526 I 0.761
EGR1 Microcebus murinus ENSMICG00000012986 I 0.761
EGR1 Myotis lucifugus ENSMLUG00000016841 I 0.761
EGR1 Macaca mulatta ENSMMUG00000018025 I 0.761
ENSMPUG00000009343 Mustela putorius furo ENSMPUG00000009343 I 0.761
ENSNLEG00000008963 Nomascus leucogenys ENSNLEG00000008963 I 0.761
EGR1 Oryctolagus cuniculus ENSOCUG00000008439 I 0.761
EGR1 Otolemur garnettii ENSOGAG00000033961 I 0.761
ENSONIG00000011752 Oreochromis niloticus ENSONIG00000011752 I 0.756
egr3 Oryzias latipes ENSORLG00000010985 I 0.756
ENSPANG00000012366 Papio anubis ENSPANG00000012366 I 0.761
EGR1 Procavia capensis ENSPCAG00000010699 I 0.761
ENSPFOG00000009968 Poecilia formosa ENSPFOG00000009968 I 0.756
ENSPFOG00000009991 Poecilia formosa ENSPFOG00000009991 I 0.756
ENSPSIG00000016357 Pelodiscus sinensis ENSPSIG00000016357 I 0.761
EGR1 Pteropus vampyrus ENSPVAG00000008351 I 0.761
Egr1 Rattus norvegicus ENSRNOG00000019422 I 0.761
ENSSHAG00000012359 Sarcophilus harrisii ENSSHAG00000012359 I 0.761
EGR1 Sus scrofa ENSSSCG00000014336 I 0.761
ENSSTOG00000028129 Ictidomys tridecemlineatus ENSSTOG00000028129 I 0.761
EGR1 Taeniopygia guttata ENSTGUG00000000003 I 0.761
egr3 Tetraodon nigroviridis ENSTNIG00000010816 I 0.756
egr3 Takifugu rubripes ENSTRUG00000002142 I 0.756
ENSTSYG00000011659 Tarsius syrichta ENSTSYG00000011659 I 0.761
EGR1 Tursiops truncatus ENSTTRG00000005503 I 0.761
ENSXMAG00000001144 Xiphophorus maculatus ENSXMAG00000001144 I 0.756
GG22637 Drosophila erecta FBgn0114808 I 0.764
GH15079 Drosophila grimshawi FBgn0122554 I 0.764
GI23713 Drosophila mojavensis FBgn0146438 I 0.764
GM15276 Drosophila sechellia FBgn0170196 I 0.764
GD19200 Drosophila simulans FBgn0190705 I 0.764
GJ23272 Drosophila virilis FBgn0210374 I 0.764
GK11242 Drosophila willistoni FBgn0213253 I 0.764
GA27565 Drosophila pseudoobscura FBgn0248930 I 0.764
GB50091 Apis mellifera GB50091 I 0.760
HMEL006505 Heliconius melpomene HMEL006505 I 0.764
ISCW010121 Ixodes scapularis ISCW010121 I 0.760
KGM_18675 Danaus plexippus KGM_18675 I 0.760
L798_06466 Zootermopsis nevadensis L798_06466 I 0.760
LOAG_00574 Loa loa LOAG_00574 I 0.780
LotgiG89896 Lottia gigantea LotgiG89896 I 0.764
MCINX002158 Melitaea cinxia MCINX002158 I 0.760
NV19003 Nasonia vitripennis NV19003 I 0.760
PHUM239230 Pediculus humanus PHUM239230 I 0.760
RPRC014701 Rhodnius prolixus RPRC014701 I 0.760
SINV20926 Solenopsis invicta SINV20926 I 0.760
SMAR001323 Strigamia maritima SMAR001323 I 0.764
Smp_026270 Schistosoma mansoni Smp_026270 I 0.827
TC004846 Tribolium castaneum TC004846 I 0.760
tetur09g02570 Tetranychus urticae tetur09g02570 I 0.760
WBGene00241269 Onchocerca volvulus WBGene00241269 I 0.780
YQE_08157 Dendroctonus ponderosae YQE_08157 I 0.760
Aan_R011027 Calypte anna Aan_R011027 I 0.761
Afo_R012195 Aptenodytes forsteri Afo_R012195 I 0.761
Cmyd_10006466 Chelonia mydas Cmyd_10006466 I 0.761
ENSBTAP00000013284-D1 Bos grunniens ENSBTAP00000013284-D1 I 0.761
ENSMMUP00000023682 Macaca fascicularis ENSMMUP00000023682 I 0.761
Myotis_brandtii_EGR1_10027790 Myotis brandtii Myotis_brandtii_EGR1_10027790 I 0.761
Ogr18097 Ophisaurus gracilis Ogr18097 I 0.761
Pvit_11315 Pogona vitticeps Pvit_11315 I 0.761
Ocbimv22022722m.g Octopus bimaculoides Ocbimv22022722m.g I 0.764
AAT71995 Xenopus tropicalis AAT71995 I 0.761
CLEC002574 Cimex lectularius CLEC002574 I 0.760
HHAL003881-PA Halyomorpha halys HHAL003881-PA I 0.764
LCUP004430 Lucilia cuprina LCUP004430 I 0.764
Sjc_0029840 Schistosoma japonicum Sjc_0029840 I 0.824
egr1.S Xenopus laevis XB-GENE-6252570 I 0.761
egr1 Xenopus tropicalis XB-GENE-853412 I 0.761
egr1.L Xenopus laevis XB-GENE-853419 I 0.761
AATE013203 Anopheles atroparvus AATE013203 I 0.764
AFAF001692 Anopheles farauti AFAF001692 I 0.764
AFUN008124 Anopheles funestus AFUN008124 I 0.764
AMEC007413 Anopheles melas AMEC007413 I 0.764
AMEM006159 Anopheles merus AMEM006159 I 0.764
AQUA009765 Anopheles quadriannulatus AQUA009765 I 0.764
ASTEI00025 Anopheles stephensi ASTEI00025 I 0.764
BGLB005339 Biomphalaria glabrata BGLB005339 I 0.760
MDOA011652 Musca domestica MDOA011652 I 0.764
PPAI005020 Phlebotomus papatasi PPAI005020 I 0.760
A_02157 Schistosoma haematobium A_02157 I 0.827
ACOC_0001010801 Angiostrongylus costaricensis ACOC_0001010801 I 0.776
ANCCAN_00201 Ancylostoma caninum ANCCAN_00201 I 0.776
ANCCEY_05459 Ancylostoma ceylanicum ANCCEY_05459 I 0.776
ANCDUO_04687 Ancylostoma duodenale ANCDUO_04687 I 0.776
ASU_03721 Ascaris suum ASU_03721 I 0.776
BTMF_0000380401 Brugia timori BTMF_0000380401 I 0.780
BXY_0899900 Bursaphelenchus xylophilus BXY_0899900 I 0.776
csin104204 Clonorchis sinensis csin104204 I 0.812
D915_08008 Fasciola hepatica D915_08008 I 0.787
D917_01971 Trichinella nativa D917_01971 I 0.792
D918_01649 Trichuris suis D918_01649 I 0.788
DICVIV_09967 Dictyocaulus viviparus DICVIV_09967 I 0.776
DILT_0001982301 Diphyllobothrium latum DILT_0001982301 I 0.764
DME_0000200401 Dracunculus medinensis DME_0000200401 I 0.772
ECANG7_02721 Echinococcus canadensis ECANG7_02721 I 0.766
ECPE_0000155301 Echinostoma caproni ECPE_0000155301 I 0.798
EEL_0000568101 Elaeophora elaphi EEL_0000568101 I 0.776
EmuJ_001017500 Echinococcus multilocularis EmuJ_001017500 I 0.766
GPLIN_000308100 Globodera pallida GPLIN_000308100 I 0.760
GPUH_0001720001 Gongylonema pulchrum GPUH_0001720001 I 0.760
GPUH_0001765101 Gongylonema pulchrum GPUH_0001765101 I 0.760
HCOI01030300 Haemonchus contortus HCOI01030300 I 0.776
HDID_0000928001 Hymenolepis diminuta HDID_0000928001 I 0.766
HPLM_0000563501 Haemonchus placei HPLM_0000563501 I 0.776
L596_g5772 Steinernema carpocapsae L596_g5772 I 0.792
L889_g30195 Steinernema feltiae L889_g30195 I 0.788
L892_g3913 Steinernema scapterisci L892_g3913 I 0.792
L893_g26806 Steinernema glaseri L893_g26806 I 0.788
L898_g4875 Steinernema monticolum L898_g4875 I 0.792
MCOS_0000604201 Mesocestoides corti MCOS_0000604201 I 0.766
MhA1_Contig770.frz3.gene18 Meloidogyne hapla MhA1_Contig770.frz3.gene18 I 0.761
nAv.1.0.1.g06838 Acanthocheilonema viteae nAv.1.0.1.g06838 I 0.780
NBR_0001794801 Nippostrongylus brasiliensis NBR_0001794801 I 0.776
nDi.2.2.2.g01941 Dirofilaria immitis nDi.2.2.2.g01941 I 0.780
nDi.2.2.2.g04849 Dirofilaria immitis nDi.2.2.2.g04849 I 0.780
nDi.2.2.2.g10231 Dirofilaria immitis nDi.2.2.2.g10231 I 0.780
nDi.2.2.2.g10233 Dirofilaria immitis nDi.2.2.2.g10233 I 0.780
NECAME_02405 Necator americanus NECAME_02405 I 0.769
nLs.2.1.2.g05421 Litomosoides sigmodontis nLs.2.1.2.g05421 I 0.769
nOo.2.0.1.g00761 Onchocerca ochengi nOo.2.0.1.g00761 I 0.780
OESDEN_04362 Oesophagostomum dentatum OESDEN_04362 I 0.769
OFLC_0000114001 Onchocerca flexuosa OFLC_0000114001 I 0.780
PTRK_0000739300 Parastrongyloides trichosuri PTRK_0000739300 I 0.777
PXEA_0003161501 Protopolystoma xenopodis PXEA_0003161501 I 0.781
RSKR_0000852700 Rhabditophanes kr3021 RSKR_0000852700 I 0.780
SBAD_0001187401 Soboliphyme baturini SBAD_0001187401 I 0.796
scaffold4-EXSNAP2012.32 Pristionchus exspectatus scaffold4-EXSNAP2012.32 I 0.760
SCUD_0000035401 Schistosoma curassoni SCUD_0000035401 I 0.827
SMUV_0000838501 Syphacia muris SMUV_0000838501 I 0.764
SPAL_0001308900 Strongyloides papillosus SPAL_0001308900 I 0.777
SSTP_0000848300 Strongyloides stercoralis SSTP_0000848300 I 0.777
SVE_0359700 Strongyloides venezuelensis SVE_0359700 I 0.777
SVUK_0000950901 Strongylus vulgaris SVUK_0000950901 I 0.776
T265_07014 Opisthorchis viverrini T265_07014 I 0.812
TASK_0000611101 Taenia asiatica TASK_0000611101 I 0.766
TCNE_0000904301 Toxocara canis TCNE_0000904301 I 0.776
TsM_000207500 Taenia solium TsM_000207500 I 0.766
TTAC_0000857601 Hydatigera taeniaeformis TTAC_0000857601 I 0.766
TTRE_0000209701 Trichuris trichiura TTRE_0000209701 I 0.788
SMU15014531 Schmidtea mediterranea SMU15014531 N 0.757