SROB_0002127201 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0002127201 T156974_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M08237_2.00 		Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB		 ChIP-seq
Najafabadi et al.(2015b)
YY1 		0.793 0.901
YY1
M02877_2.00 		Homo sapiens
NVSRCCATNDH
DHNATGGYSBN		 SELEX
Jolma et al.(2013)
YY1_1 		0.793 0.891
YY1
M04406_2.00 		Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK
MGCACDNWHNVYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1 		0.793 0.891
YY1
M04407_2.00 		Homo sapiens
NKMCGCCATYTTGN
NCAARATGGCGKMN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2 		0.793 0.891
YY1
M05845_2.00 		Homo sapiens
NNNVGCCATNWYD
HRWNATGGCBNNN		 SMiLE-seq
Isakova et al.(2017)
YY1 		0.793 0.891
YY1
M08288_2.00 		Homo sapiens
GCCGCCATBKYB
VRMVATGGCGGC		 ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE 		0.793 0.891
YY1
M08085_2.00 		Homo sapiens
KCVGCCATBTTK
MAAVATGGCBGM		 ChIP-seq
Mathelier et al.(2014)
MA0095.2 		0.793 0.891
YY1
M07855_2.00 		Homo sapiens
VNVGCCGCCATBTTK
MAAVATGGCGGCBNB		 ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha 		0.793 0.891
YY1
M07856_2.00 		Homo sapiens
GCSGCCATBTT
AAVATGGCSGC		 ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha 		0.793 0.891
YY1
M07857_2.00 		Homo sapiens
BSNVGCSGCCATBTT
AAVATGGCSGCBNSV		 ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha 		0.793 0.891
YY1
M07858_2.00 		Homo sapiens
NNVGCSGCCATBTTK
MAAVATGGCSGCBNN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha 		0.793 0.891
YY1
M07859_2.00 		Homo sapiens
SBSGCSGCCATBTTK
MAAVATGGCSGCSVS		 ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD 		0.793 0.891
YY1
M07860_2.00 		Homo sapiens
GCCGCCATBTTKNNN
NNNMAAVATGGCGGC		 ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha 		0.793 0.891
YY1
M07861_2.00 		Homo sapiens
VGCSGCCATBTTK
MAAVATGGCSGCB		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD 		0.793 0.891
YY1
M08865_2.00 		Homo sapiens
GCCGCCATYTTK
MAARATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A 		0.793 0.891
Yy1
M08971_2.00 		Mus musculus
GCCGCCATBTTB
VAAVATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A 		0.793 0.891
YY1
M10138_2.00 		Homo sapiens
NVNNDCCATNTWNNVWN
NWBNNWANATGGHNNBN		 Transfac
Matys et al.(2006)
V$YY1_01 		0.793 0.891
YY1
M10139_2.00 		Homo sapiens
NNNSBGCCATCTDSNHTSND
HNSADNSHAGATGGCVSNNN		 Transfac
Matys et al.(2006)
V$YY1_02 		0.793 0.891
YY1
M10140_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_03 		0.793 0.891
YY1
M10141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_07 		0.793 0.891
YY1
M10142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_08 		0.793 0.891
YY1
M10143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q4_01 		0.793 0.891
YY1
M10144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_02 		0.793 0.891
YY1
M10145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_03 		0.793 0.891
YY1
M10146_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6 		0.793 0.891
YY1
M04408_2.00 		Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY
RGCACDWWHHGYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1 		0.793 0.891
YY1
M04409_2.00 		Homo sapiens
RKCSGCCATYTTGD
HCAARATGGCSGMY		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2 		0.793 0.891
TYY2_RAT
M10385_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY2 		0.785 0.837
pho
M06053_2.00 		Drosophila melanogaster
KNVGCCATDAHNSY
RSNDTHATGGCBNM		 B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521 		0.778 0.870
pho
M06054_2.00 		Drosophila melanogaster
KCCGCCATHWTK
MAWDATGGCGGM		 B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521 		0.778 0.870
pho
M06055_2.00 		Drosophila melanogaster
NKBCGCCATHWTKNN
NNMAWDATGGCGVMN		 B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521 		0.778 0.870
phol
M06144_2.00 		Drosophila melanogaster
CGCCATHTTK
MAADATGGCG		 B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997 		0.757 0.793
phol
M06145_2.00 		Drosophila melanogaster
NKNCGCCATNTTKNN
NNMAANATGGCGNMN		 B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997 		0.757 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0002127201-mRNA-1 C2H2 ZF 118 142
SROB_0002127201-mRNA-1 C2H2 ZF 147 169
SROB_0002127201-mRNA-1 C2H2 ZF 175 199
SROB_0002127201-mRNA-1 C2H2 ZF 205 229

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FOXO3 Homo sapiens ENSG00000118689 D
FOXO6 Homo sapiens ENSG00000204060 D
Foxo3 Mus musculus ENSMUSG00000048756 D
Foxo6 Mus musculus ENSMUSG00000052135 D
foxo Drosophila melanogaster FBgn0038197 D
ACYPI008827 Acyrthosiphon pisum ACYPI008827 I
AGAP001577 Anopheles gambiae AGAP001577 I
Aqu1.217829 Amphimedon queenslandica Aqu1.217829 I
Bm5392 Brugia malayi Bm5392 I
CGI_10007980 Crassostrea gigas CGI_10007980 I
EFV53044 Trichinella spiralis EFV53044 I
ENSAMEG00000008158 Ailuropoda melanoleuca ENSAMEG00000008158 I
ENSAMXG00000000626 Astyanax mexicanus ENSAMXG00000000626 I
ENSAMXG00000001483 Astyanax mexicanus ENSAMXG00000001483 I
ENSAMXG00000009884 Astyanax mexicanus ENSAMXG00000009884 I
ENSAMXG00000014766 Astyanax mexicanus ENSAMXG00000014766 I
FOXO3 Bos taurus ENSBTAG00000011234 I
FOXO3 Canis familiaris ENSCAFG00000003783 I
FOXO6 Callithrix jacchus ENSCJAG00000003070 I
FOXO3 Callithrix jacchus ENSCJAG00000005929 I
FOXO3 Cavia porcellus ENSCPOG00000021906 I
FOXO6 Cavia porcellus ENSCPOG00000022256 I
ENSCSAG00000001157 Chlorocebus sabaeus ENSCSAG00000001157 I
ENSCSAG00000015174 Chlorocebus sabaeus ENSCSAG00000015174 I
foxo3a Danio rerio ENSDARG00000023058 I
si:ch211-206a7.2 Danio rerio ENSDARG00000024619 I
foxo3b Danio rerio ENSDARG00000042904 I
foxo1b Danio rerio ENSDARG00000061549 I
foxo1a Danio rerio ENSDARG00000099555 I
si:dkey-11f5.5 Danio rerio ENSDARG00000100486 I
FOXO3 Dasypus novemcinctus ENSDNOG00000005257 I
FOXO6 Dasypus novemcinctus ENSDNOG00000032075 I
ENSDORG00000002590 Dipodomys ordii ENSDORG00000002590 I
ENSDORG00000013871 Dipodomys ordii ENSDORG00000013871 I
FOXO3 Echinops telfairi ENSETEG00000004130 I
ENSFALG00000001139 Ficedula albicollis ENSFALG00000001139 I
ENSFCAG00000024925 Felis catus ENSFCAG00000024925 I
si:ch211-206a7.2 Gasterosteus aculeatus ENSGACG00000007819 I
foxo3b Gasterosteus aculeatus ENSGACG00000008910 I
foxo3a Gasterosteus aculeatus ENSGACG00000011645 I
foxo1a Gasterosteus aculeatus ENSGACG00000011918 I
foxo1b Gasterosteus aculeatus ENSGACG00000020424 I
FOXO3 Gorilla gorilla ENSGGOG00000003517 I
FOXO6 Gorilla gorilla ENSGGOG00000026271 I
ENSGMOG00000002305 Gadus morhua ENSGMOG00000002305 I
ENSGMOG00000005771 Gadus morhua ENSGMOG00000005771 I
ENSGMOG00000012748 Gadus morhua ENSGMOG00000012748 I
ENSLACG00000009595 Latimeria chalumnae ENSLACG00000009595 I
ENSLACG00000010206 Latimeria chalumnae ENSLACG00000010206 I
ENSLACG00000016385 Latimeria chalumnae ENSLACG00000016385 I
FOXO3 Loxodonta africana ENSLAFG00000005834 I
ENSLOCG00000003028 Lepisosteus oculatus ENSLOCG00000003028 I
ENSLOCG00000008807 Lepisosteus oculatus ENSLOCG00000008807 I
ENSLOCG00000016605 Lepisosteus oculatus ENSLOCG00000016605 I
ENSMEUG00000009927 Macropus eugenii ENSMEUG00000009927 I
ENSMEUG00000014523 Macropus eugenii ENSMEUG00000014523 I
ENSMICG00000013973 Microcebus murinus ENSMICG00000013973 I
ENSMICG00000014311 Microcebus murinus ENSMICG00000014311 I
FOXO3 Myotis lucifugus ENSMLUG00000002590 I
FOXO3 Macaca mulatta ENSMMUG00000020369 I
FOXO6 Monodelphis domestica ENSMODG00000017333 I
FOXO3 Monodelphis domestica ENSMODG00000017994 I
ENSMPUG00000009847 Mustela putorius furo ENSMPUG00000009847 I
ENSMPUG00000014082 Mustela putorius furo ENSMPUG00000014082 I
ENSNLEG00000012446 Nomascus leucogenys ENSNLEG00000012446 I
ENSOARG00000020357 Ovis aries ENSOARG00000020357 I
FOXO3 Oryctolagus cuniculus ENSOCUG00000010471 I
FOXO4 Otolemur garnettii ENSOGAG00000025297 I
FOXO3 Otolemur garnettii ENSOGAG00000027196 I
FOXO6 Otolemur garnettii ENSOGAG00000028037 I
ENSONIG00000000638 Oreochromis niloticus ENSONIG00000000638 I
ENSONIG00000005435 Oreochromis niloticus ENSONIG00000005435 I
ENSONIG00000005674 Oreochromis niloticus ENSONIG00000005674 I
ENSONIG00000010293 Oreochromis niloticus ENSONIG00000010293 I
ENSONIG00000013292 Oreochromis niloticus ENSONIG00000013292 I
ENSONIG00000016186 Oreochromis niloticus ENSONIG00000016186 I
FOXO6 Ochotona princeps ENSOPRG00000003070 I
foxo1 Oryzias latipes ENSORLG00000003107 I
foxo1b Oryzias latipes ENSORLG00000007715 I
si:ch211-206a7.2 Oryzias latipes ENSORLG00000008208 I
foxo3 Oryzias latipes ENSORLG00000013450 I
si:dkey-11f5.5 Oryzias latipes ENSORLG00000014219 I
ENSPANG00000000435 Papio anubis ENSPANG00000000435 I
ENSPANG00000015284 Papio anubis ENSPANG00000015284 I
FOXO3 Procavia capensis ENSPCAG00000008041 I
FOXO6 Procavia capensis ENSPCAG00000013290 I
ENSPFOG00000005111 Poecilia formosa ENSPFOG00000005111 I
ENSPFOG00000006480 Poecilia formosa ENSPFOG00000006480 I
ENSPFOG00000008773 Poecilia formosa ENSPFOG00000008773 I
ENSPFOG00000014431 Poecilia formosa ENSPFOG00000014431 I
ENSPFOG00000015252 Poecilia formosa ENSPFOG00000015252 I
ENSPFOG00000019537 Poecilia formosa ENSPFOG00000019537 I
ENSPPYG00000001477 Pongo abelii ENSPPYG00000001477 I
ENSPPYG00000016896 Pongo abelii ENSPPYG00000016896 I
ENSPSIG00000007776 Pelodiscus sinensis ENSPSIG00000007776 I
FOXO3 Pan troglodytes ENSPTRG00000018476 I
FOXO3 Pteropus vampyrus ENSPVAG00000001137 I
Foxo3 Rattus norvegicus ENSRNOG00000000299 I
Foxo6 Rattus norvegicus ENSRNOG00000032639 I
ENSSHAG00000003662 Sarcophilus harrisii ENSSHAG00000003662 I
FOXO3 Sus scrofa ENSSSCG00000004387 I
ENSSTOG00000022339 Ictidomys tridecemlineatus ENSSTOG00000022339 I
ENSSTOG00000026753 Ictidomys tridecemlineatus ENSSTOG00000026753 I
FOXO1 Taeniopygia guttata ENSTGUG00000012008 I
FOXO3 Taeniopygia guttata ENSTGUG00000012135 I
si:ch211-206a7.2 Tetraodon nigroviridis ENSTNIG00000009804 I
foxo1b Tetraodon nigroviridis ENSTNIG00000011758 I
foxo3a Tetraodon nigroviridis ENSTNIG00000019314 I
foxo3b Takifugu rubripes ENSTRUG00000001458 I
si:dkey-11f5.5 Takifugu rubripes ENSTRUG00000001776 I
foxo3a Takifugu rubripes ENSTRUG00000004868 I
si:ch211-206a7.2 Takifugu rubripes ENSTRUG00000009753 I
foxo1a Takifugu rubripes ENSTRUG00000014453 I
foxo1b Takifugu rubripes ENSTRUG00000016495 I
ENSTTRG00000005580 Tursiops truncatus ENSTTRG00000005580 I
FOXO3 Tursiops truncatus ENSTTRG00000017232 I
ENSXMAG00000000408 Xiphophorus maculatus ENSXMAG00000000408 I
ENSXMAG00000003269 Xiphophorus maculatus ENSXMAG00000003269 I
ENSXMAG00000007378 Xiphophorus maculatus ENSXMAG00000007378 I
ENSXMAG00000012178 Xiphophorus maculatus ENSXMAG00000012178 I
ENSXMAG00000014478 Xiphophorus maculatus ENSXMAG00000014478 I
ENSXMAG00000015269 Xiphophorus maculatus ENSXMAG00000015269 I
foxo Drosophila pseudoobscura FBgn0076264 I
foxo Drosophila grimshawi FBgn0129734 I
foxo Drosophila mojavensis FBgn0144713 I
foxo Drosophila virilis FBgn0201557 I
foxo Drosophila willistoni FBgn0224664 I
GB48301 Apis mellifera GB48301 I
HelroG64772 Helobdella robusta HelroG64772 I
LOAG_18029 Loa loa LOAG_18029 I
MCINX004005 Melitaea cinxia MCINX004005 I
NV14158 Nasonia vitripennis NV14158 I
SPU_009178 Strongylocentrotus purpuratus SPU_009178 I
SPU_028698 Strongylocentrotus purpuratus SPU_028698 I
TriadG25137 Trichoplax adhaerens TriadG25137 I
ENSBTAP00000014920-D1 Bos grunniens ENSBTAP00000014920-D1 I
ENSP00000339527 Macaca fascicularis ENSP00000339527 I
Myotis_brandtii_Foxo6_10016755 Myotis brandtii Myotis_brandtii_Foxo6_10016755 I
Pvit_12542 Pogona vitticeps Pvit_12542 I
Sakowv30038013m.g Saccoglossus kowalevskii Sakowv30038013m.g I
foxo6.S Xenopus laevis XB-GENE-6259110 I
foxo3 Xenopus tropicalis XB-GENE-945072 I
foxo3.L Xenopus laevis XB-GENE-945076 I
XP_002939401 Xenopus tropicalis XP_002939401 I
XP_002167754.1 Hydra magnipapillata XP_002167754.1 I
BGLB012045 Biomphalaria glabrata BGLB012045 I
D917_06987 Trichinella nativa D917_06987 I
D918_00830 Trichuris suis D918_00830 I
DME_0000896101 Dracunculus medinensis DME_0000896101 I
HCOI00585700 Haemonchus contortus HCOI00585700 I
SSTP_0001206800 Strongyloides stercoralis SSTP_0001206800 I
TMUE_s0073000800 Trichuris muris TMUE_s0073000800 I
TTRE_0000521201 Trichuris trichiura TTRE_0000521201 I
ENSBTAP00000033192-D1 Bos grunniens ENSBTAP00000033192-D1 N