CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001921701
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0001921701
T157295_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001921701-mRNA-1
C2H2 ZF
56
78
LTCTHCDRTFSSHIGRVGHLRIH
SSLN_0001921701-mRNA-1
C2H2 ZF
98
120
LNCSPCPRTFTHRMGLLGHMHLH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G37548
Glycine max
GLYMA08G37548
N
ALDH6B2
Populus trichocarpa
POPTR_0005s19150
N
VIT_00s0218g00070
Vitis vinifera
VIT_00s0218g00070
N
Cla014312
Citrullus lanatus
Cla014312
N
29235.m000233
Ricinus communis
29235.m000233
N
cassava12560.valid.m1
Manihot esculenta
cassava12560.valid.m1
N
cassava31348.valid.m1
Manihot esculenta
cassava31348.valid.m1
N
Cucsa.103870
Cucumis sativus
Cucsa.103870
N
Ciclev10024788m.g
Citrus clementina
Ciclev10024788m.g
N
evm.TU.supercontig_10.74
Carica papaya
evm.TU.supercontig_10.74
N
evm.TU.supercontig_20.29
Carica papaya
evm.TU.supercontig_20.29
N
gene20707-v1.0-hybrid
Fragaria vesca
gene20707-v1.0-hybrid
N
Gorai.011G109400
Gossypium raimondii
Gorai.011G109400
N
MDP0000168881
Malus domestica
MDP0000168881
N
orange1.1g001665m.g
Citrus sinensis
orange1.1g001665m.g
N
PK09964.1
Cannabis sativa
PK09964.1
N