CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALDH6B2
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0005s19150
T180079_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s19150.1
FAR1
31
115
KYVRDFGANQGYVVTIKKSRRDRRVILGCDRGGIYRNRRKIDESQRKRKACSRLINCPFEAIGKKEDDMWVLNIKNGEHNHEPLK
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014312
Citrullus lanatus
Cla014312
N
0.893
MDP0000168881
Malus domestica
MDP0000168881
N
0.893
PK09964.1
Cannabis sativa
PK09964.1
N
0.893
VIT_00s0218g00070
Vitis vinifera
VIT_00s0218g00070
N
0.732
29804.m001547
Ricinus communis
29804.m001547
N
0.732
gene27124-v1.0-hybrid
Fragaria vesca
gene27124-v1.0-hybrid
N
0.732
29235.m000233
Ricinus communis
29235.m000233
N
0.723
cassava31348.valid.m1
Manihot esculenta
cassava31348.valid.m1
N
0.723
Cucsa.103870
Cucumis sativus
Cucsa.103870
N
0.723
PRUPE_ppa002231mg
Prunus persica
PRUPE_ppa002231mg
N
0.720
Eucgr.I02605
Eucalyptus grandis
Eucgr.I02605
N
0.716
Gorai.011G109400
Gossypium raimondii
Gorai.011G109400
N
0.714
GLYMA08G37548
Glycine max
GLYMA08G37548
N
0.707
TCM_000959
Theobroma cacao
TCM_000959
N
0.707
VIT_03s0132g00230
Vitis vinifera
VIT_03s0132g00230
N
0.704