CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0418900
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_0418900
T157405_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0418900.1
C2H2 ZF
77
98
KCSVCGLVVQHPSRIKEHSRTH
SVE_0418900.1
C2H2 ZF
104
127
FECDICNEKFSRKCSLNLHIKRKH
SVE_0418900.1
C2H2 ZF
133
157
FHCTWECGKSFPSVALLNEHIRYYH
SVE_0418900.1
C2H2 ZF
163
188
YKCTVLNCGSLFVRRQQFLRHLKNVH
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMRZ_0000182901
Schistosoma margrebowiei
SMRZ_0000182901
N
TTAC_0000966501
Hydatigera taeniaeformis
TTAC_0000966501
N
TsM_000969500
Taenia solium
TsM_000969500
N
TRE_0000227901
Trichobilharzia regenti
TRE_0000227901
N
TASK_0000790101
Taenia asiatica
TASK_0000790101
N
T265_13043
Opisthorchis viverrini
T265_13043
N
SSLN_0000288401
Schistocephalus solidus
SSLN_0000288401
N
SROB_0001249501
Schistosoma rodhaini
SROB_0001249501
N
SMTD_0000057601
Schistosoma mattheei
SMTD_0000057601
N
Smp_049580
Schistosoma mansoni
Smp_049580
N
PXEA_0000525901
Protopolystoma xenopodis
PXEA_0000525901
N
MCOS_0000026301
Mesocestoides corti
MCOS_0000026301
N
EmuJ_000202700
Echinococcus multilocularis
EmuJ_000202700
N
ECANG7_07920
Echinococcus canadensis
ECANG7_07920
N
D915_07143
Fasciola hepatica
D915_07143
N
csin109387
Clonorchis sinensis
csin109387
N
A_07186
Schistosoma haematobium
A_07186
N