CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0000182901
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0000182901
T156250_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0000182901-mRNA-1
C2H2 ZF
744
767
FICNQCRRNFSSLAELNRHTIEAH
SMRZ_0000182901-mRNA-1
C2H2 ZF
770
792
FRCTICSAHFTQRSNLQRHSLKH
SMRZ_0000182901-mRNA-1
C2H2 ZF
798
821
FTCNLCKKEYYRKDHLVRHIEVTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_049580
Schistosoma mansoni
Smp_049580
N
0.827
A_07186
Schistosoma haematobium
A_07186
N
0.827
SMTD_0000057601
Schistosoma mattheei
SMTD_0000057601
N
0.827
SROB_0001249501
Schistosoma rodhaini
SROB_0001249501
N
0.827
TRE_0000227901
Trichobilharzia regenti
TRE_0000227901
N
0.827
ECANG7_07920
Echinococcus canadensis
ECANG7_07920
N
0.808
EmuJ_000202700
Echinococcus multilocularis
EmuJ_000202700
N
0.808
MCOS_0000026301
Mesocestoides corti
MCOS_0000026301
N
0.808
TASK_0000790101
Taenia asiatica
TASK_0000790101
N
0.808
TsM_000969500
Taenia solium
TsM_000969500
N
0.808
TTAC_0000966501
Hydatigera taeniaeformis
TTAC_0000966501
N
0.808
csin109387
Clonorchis sinensis
csin109387
N
0.804
ECPE_0000401401
Echinostoma caproni
ECPE_0000401401
N
0.804
T265_13043
Opisthorchis viverrini
T265_13043
N
0.804
D915_07143
Fasciola hepatica
D915_07143
N
0.788
PXEA_0000525901
Protopolystoma xenopodis
PXEA_0000525901
N
0.788
SSLN_0000288401
Schistocephalus solidus
SSLN_0000288401
N
0.777