CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0001278101
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0001278101
T158011_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001278101-mRNA-1
C2H2 ZF
424
446
YFCHLCNKVYYSMSALKMHVRTH
TRE_0001278101-mRNA-1
C2H2 ZF
450
472
CKCNLCGKAFSRMWLLNGHLRTH
TRE_0001278101-mRNA-1
C2H2 ZF
478
500
FACIVCTRAFADRSNLRAHMQTH
TRE_0001278101-mRNA-1
C2H2 ZF
506
527
YQCSHCDRTFSRMGLLTKHQTT
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_068240
Schistosoma mansoni
Smp_068240
N
0.819
Sjc_0048660
Schistosoma japonicum
Sjc_0048660
N
0.822
A_06784
Schistosoma haematobium
A_06784
N
0.807
csin108446
Clonorchis sinensis
csin108446
N
0.782
D915_03988
Fasciola hepatica
D915_03988
N
0.779
PXEA_0001482701
Protopolystoma xenopodis
PXEA_0001482701
N
0.784
SCUD_0002117401
Schistosoma curassoni
SCUD_0002117401
N
0.819
SMTD_0001402601
Schistosoma mattheei
SMTD_0001402601
N
0.819
T265_03041
Opisthorchis viverrini
T265_03041
N
0.782