CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin108446
(
Clonorchis sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
csin108446
T152664_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin108446
C2H2 ZF
499
521
FCCHICTKIYYSMSALKMHVRTH
csin108446
C2H2 ZF
525
547
CKCNLCGKAFSRMWLLNGHLRTH
csin108446
C2H2 ZF
553
575
FACVVCARAFADRSNLRAHMQTH
csin108446
C2H2 ZF
581
602
YRCVRCSKTFSRMGLLTKHQSS
Links
Other
C2H2 ZF
family TFs
Other
Clonorchis sinensis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
T265_03041
Opisthorchis viverrini
T265_03041
N
0.827
D915_03988
Fasciola hepatica
D915_03988
N
0.811
PXEA_0001482701
Protopolystoma xenopodis
PXEA_0001482701
N
0.789
TRE_0001278101
Trichobilharzia regenti
TRE_0001278101
N
0.782
Smp_068240
Schistosoma mansoni
Smp_068240
N
0.779
Sjc_0048660
Schistosoma japonicum
Sjc_0048660
N
0.779
SCUD_0002117401
Schistosoma curassoni
SCUD_0002117401
N
0.779
SMTD_0001402601
Schistosoma mattheei
SMTD_0001402601
N
0.779
A_06784
Schistosoma haematobium
A_06784
N
0.767