LCUP002242 (Lucilia cuprina)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 LCUP002242 T159512_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP002242-PA C2HC ZF 1016 1044
LCUP002242-PA C2HC ZF 1061 1089

Links

Other C2HC ZF family TFs
Other Lucilia cuprina TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_09562 Cicer arietinum Ca_09562 I
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N
Traes_2AL_773EA7A5A Triticum aestivum Traes_2AL_773EA7A5A N
Traes_2AS_AE392E835 Triticum aestivum Traes_2AS_AE392E835 N
Traes_2BS_AF4D5351B Triticum aestivum Traes_2BS_AF4D5351B N
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N
Traes_7DS_7B303CBAF Triticum aestivum Traes_7DS_7B303CBAF N
TRIUR3_26386 Triticum urartu TRIUR3_26386 N
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N
Ca_08511 Cicer arietinum Ca_08511 N
Pm007031 Prunus mume Pm007031 N
TCM_008731 Theobroma cacao TCM_008731 N
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N
Pavir.Ga01952 Panicum virgatum Pavir.Ga01952 N
Pavir.Gb01963 Panicum virgatum Pavir.Gb01963 N
PK06349.1 Cannabis sativa PK06349.1 N
PDK_20s1550381g002 Phoenix dactylifera PDK_20s1550381g002 N
OGLUM04G10170 Oryza glumaepatula OGLUM04G10170 N
BRADI5G08167 Brachypodium distachyon BRADI5G08167 N
F775_11712 Aegilops tauschii F775_11712 N
GLYMA05G28090 Glycine max GLYMA05G28090 N
GLYMA18G00840 Glycine max GLYMA18G00840 N
GRMZM2G143205 Zea mays GRMZM2G143205 N
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N
LPERR04G07320 Leersia perrieri LPERR04G07320 N
MTR_8g080800 Medicago truncatula MTR_8g080800 N
OB04G17680 Oryza brachyantha OB04G17680 N
OBART04G10490 Oryza barthii OBART04G10490 N
BGIOSGA016274 Oryza indica BGIOSGA016274 N
OPUNC04G08570 Oryza punctata OPUNC04G08570 N
ORGLA02G0342600 Oryza glaberrima ORGLA02G0342600 N
ORGLA04G0075400 Oryza glaberrima ORGLA04G0075400 N
ORUFI04G11670 Oryza rufipogon ORUFI04G11670 N
OS04G0388500 Oryza sativa OS04G0388500 N
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N
Sb06g013850 Sorghum bicolor Sb06g013850 N
Si009249m.g Setaria italica Si009249m.g N
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N