fgenesh1_pg.C_scaffold_1000989 (Cryphonectria parasitica)
CENPB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04218 (CENP-B_N) IPR006695 fgenesh1_pg.C_scaffold_1000989 T162639_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU00392
M01898_2.00 		Neurospora crassa
YGTCACAY
RTGTGACR		 PBM
Weirauch et al.(2014)
pTH9311 		0.792 0.792
NCU00392
M01899_2.00 		Neurospora crassa
NRTCACNN
NNGTGAYN		 PBM
Weirauch et al.(2014)
pTH9658 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_1000989 CENPB 152 206

Links

Other CENPB family TFs
Other Cryphonectria parasitica TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa002166mg Prunus persica PRUPE_ppa002166mg N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Ciclev10029999m.g Citrus clementina Ciclev10029999m.g N 0.000