CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.23.237.1
(
Phytophthora capsici
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
gw1.23.237.1
T162642_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.23.237.1
CENPB
203
256
RKKRVRYLRDTDRRNIIKRIENGEKQAALAREFGVTRAAICHIKKNRFEILSRY
Links
Other
CENPB
family TFs
Other
Phytophthora capsici
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-piw_contig_496-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_496-snap-gene-0.3
N
0.705
PYU1_G008786
Pythium ultimum
PYU1_G008786
N
0.791
PYU1_G007782
Pythium ultimum
PYU1_G007782
N
0.843
PITG_12841
Phytophthora infestans
PITG_12841
N
0.736
PITG_12840
Phytophthora infestans
PITG_12840
N
1.000
Physo143270
Phytophthora sojae
Physo143270
N
1.000
Physo143269
Phytophthora sojae
Physo143269
N
0.816
Physo134088
Phytophthora sojae
Physo134088
N
0.712
Physo134087
Phytophthora sojae
Physo134087
N
0.744
Phyra93994
Phytophthora ramorum
Phyra93994
N
0.788
Phyra75006
Phytophthora ramorum
Phyra75006
N
0.925
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
0.849
F443_02365
Phytophthora parasitica
F443_02365
N
1.000
maker-piw_contig_1851-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1851-snap-gene-0.3
N
0.750
maker-piw_contig_165-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_165-snap-gene-0.13
N
0.865
maker-pir_contig_87-fgenesh-gene-0.17
Pythium irregulare
maker-pir_contig_87-fgenesh-gene-0.17
N
0.865
maker-pir_contig_1013-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1013-fgenesh-gene-0.0
N
0.791
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
0.791
maker-par_contig_6341-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6341-snap-gene-0.1
N
0.745
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
0.774
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
0.925
fgenesh-pir_contig_1013-abinit-gene-0.11
Pythium irregulare
fgenesh-pir_contig_1013-abinit-gene-0.11
N
0.778
F443_02366
Phytophthora parasitica
F443_02366
N
0.731