CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra75006
(
Phytophthora ramorum
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
Phyra75006
T162153_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra75006
CENPB
215
268
KKKRVRYLRDTDRRNIIKRIENGEKQASLAREFGVTRAAICHIKKNRFEILSRY
Links
Other
CENPB
family TFs
Other
Phytophthora ramorum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
1.000
F443_02365
Phytophthora parasitica
F443_02365
N
0.980
PITG_12840
Phytophthora infestans
PITG_12840
N
0.980
Physo143270
Phytophthora sojae
Physo143270
N
0.979
gw1.23.237.1
Phytophthora capsici
gw1.23.237.1
N
0.925
maker-pir_contig_87-fgenesh-gene-0.17
Pythium irregulare
maker-pir_contig_87-fgenesh-gene-0.17
N
0.885
maker-piw_contig_165-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_165-snap-gene-0.13
N
0.885
PYU1_G007782
Pythium ultimum
PYU1_G007782
N
0.882
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
0.830
Phyra93994
Phytophthora ramorum
Phyra93994
N
0.827
Physo143269
Phytophthora sojae
Physo143269
N
0.816
PITG_12841
Phytophthora infestans
PITG_12841
N
0.792
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
0.791
F443_02366
Phytophthora parasitica
F443_02366
N
0.788
maker-pir_contig_1013-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1013-fgenesh-gene-0.0
N
0.767
PYU1_G008786
Pythium ultimum
PYU1_G008786
N
0.767
fgenesh-pir_contig_1013-abinit-gene-0.11
Pythium irregulare
fgenesh-pir_contig_1013-abinit-gene-0.11
N
0.756
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
0.755
maker-piw_contig_1851-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1851-snap-gene-0.3
N
0.727
maker-par_contig_6341-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6341-snap-gene-0.1
N
0.723
Physo134087
Phytophthora sojae
Physo134087
N
0.721