AT3G16940 (Arabidopsis thaliana)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 AT3G16940 T163006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.868 0.868
Q2WEL1_ORYSA
M10406_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBT_01 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G16940.1 CG-1 31 145
AT3G16940.2 CG-1 31 145
AT3G16940.3 CG-1 4 118

Links

Other CG-1 family TFs
Other Arabidopsis thaliana TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G426154 Zea mays GRMZM2G426154 N
Pavir.Ba03831 Panicum virgatum Pavir.Ba03831 N
Pavir.J17924 Panicum virgatum Pavir.J17924 N
Pavir.J24898 Panicum virgatum Pavir.J24898 N