CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ba03831
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Ba03831
T265040_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba03831.1.p
mTERF
192
310
DLGRVRMIIKWLRSIYVKGDFLGRVLANGGSFLNRSFEELEEIIDYLESCGVRRDWIGYVVSRCPQLLNLSLDELETRVRFYMDMGMDEKDFGTMVYDYPRVLGFLSLEEMNSKVQYLK
Pavir.Ba03831.1.p
mTERF
297
413
LSLEEMNSKVQYLKEFGLSNEELGSLLAFKPQLMACSIKERWKPLVKYLYHLNVSRDGMKRMLLVQPTIFCLDLETVIAPKVQFLQDIGVRSDAIGNVLVKFPPVLTYSLYKKIRPV
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J17924
Panicum virgatum
Pavir.J17924
N
0.974
Pavir.J24898
Panicum virgatum
Pavir.J24898
N
0.972
GRMZM2G426154
Zea mays
GRMZM2G426154
N
0.910
Pavir.J31727
Panicum virgatum
Pavir.J31727
N
0.768