CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_000198
(
Theobroma cacao
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
TCM_000198
T165185_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX90843
CSD
13
79
SAGKVLWFNDQKGFGFIRPDDESEDLFVHQSSIKSDGYRSLAEGESVEFTVSQGNGGKTQAVDVTAI
Links
Other
CSD
family TFs
Other
Theobroma cacao
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa010531mg
Prunus persica
PRUPE_ppa010531mg
N
0.727
PK01533.1
Cannabis sativa
PK01533.1
N
0.712
Pavir.J33226
Panicum virgatum
Pavir.J33226
N
0.712
Pavir.Ab00211
Panicum virgatum
Pavir.Ab00211
N
0.714
Gorai.008G062500
Gossypium raimondii
Gorai.008G062500
N
0.909
Gorai.007G193700
Gossypium raimondii
Gorai.007G193700
N
0.864
evm.TU.supercontig_6.261
Carica papaya
evm.TU.supercontig_6.261
N
0.803
29405.m000161
Ricinus communis
29405.m000161
N
0.712
Pm026767
Prunus mume
Pm026767
N
0.727
Traes_6AS_539B381F1
Triticum aestivum
Traes_6AS_539B381F1
N
0.712
Sb04g001720
Sorghum bicolor
Sb04g001720
N
0.712
BGIOSGA007226
Oryza indica
BGIOSGA007226
N
0.712
OS02G0121100
Oryza sativa
OS02G0121100
N
0.712
ORUFI02G01580
Oryza rufipogon
ORUFI02G01580
N
0.712
OPUNC02G01060
Oryza punctata
OPUNC02G01060
N
0.712
ONIVA02G01490
Oryza nivara
ONIVA02G01490
N
0.712
OMERI02G00930
Oryza meridionalis
OMERI02G00930
N
0.712
OGLUM02G01470
Oryza glumaepatula
OGLUM02G01470
N
0.712
GRMZM2G389768
Zea mays
GRMZM2G389768
N
0.712
GLYMA12G03470
Glycine max
GLYMA12G03470
N
0.712
GLYMA11G11290
Glycine max
GLYMA11G11290
N
0.712
CSDP1
Arabidopsis lyrata
fgenesh2_kg.7__465__AT4G36020.1
N
0.727