CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN23808
(
Caenorhabditis brenneri
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
CBN23808
T165994_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN23808
CSL
205
367
ISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKVKKERIASLYKTLKSTSQKELMDNDPAMDQQSTELVAYIGIGSDHTERQQLDFSTGKVRHPGDSRQDPSIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGSFVSQRIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Caenorhabditis brenneri
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Homo sapiens
ENSG00000168214
D
0.812
TRE_0000568701
Trichobilharzia regenti
TRE_0000568701
I
0.778
SMUV_0001013801
Syphacia muris
SMUV_0001013801
I
0.773
SMTD_0001089601
Schistosoma mattheei
SMTD_0001089601
I
0.778
SMRZ_0000802101
Schistosoma margrebowiei
SMRZ_0000802101
I
0.778
SCUD_0000326701
Schistosoma curassoni
SCUD_0000326701
I
0.778
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
0.810
NECAME_17145
Necator americanus
NECAME_17145
I
0.857
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.833
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
Sjc_0108400
Schistosoma japonicum
Sjc_0108400
I
0.778
D915_08967
Fasciola hepatica
D915_08967
I
0.778
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.882
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.810
ANCCAN_18251
Ancylostoma caninum
ANCCAN_18251
N
0.714
CBG05522
Caenorhabditis briggsae
CBG05522
N
0.844
lag-1
Caenorhabditis elegans
WBGene00002245
N
0.823
CRE27979
Caenorhabditis remanei
CRE27979
N
0.803
CRE16913
Caenorhabditis remanei
CRE16913
N
0.803
CJA05333
Caenorhabditis japonica
CJA05333
N
0.774
CBN20968
Caenorhabditis brenneri
CBN20968
N
0.914
CBN18395
Caenorhabditis brenneri
CBN18395
N
0.855
CBN08231
Caenorhabditis brenneri
CBN08231
N
0.775
CBN00465
Caenorhabditis brenneri
CBN00465
N
0.921