CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
lag-1
(
Caenorhabditis elegans
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
WBGene00002245
T166286_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
K08B4.1a
CSL
217
380
ISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTD
K08B4.1b
CSL
215
378
ISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTD
K08B4.1c
CSL
171
334
ISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTD
K08B4.1d
CSL
334
497
ISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Caenorhabditis elegans
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.882
NECAME_17145
Necator americanus
NECAME_17145
I
0.857
CBN00465
Caenorhabditis brenneri
CBN00465
N
0.843
CBG05522
Caenorhabditis briggsae
CBG05522
N
0.837
CBN20968
Caenorhabditis brenneri
CBN20968
N
0.829
CBN23808
Caenorhabditis brenneri
CBN23808
N
0.823
CRE16913
Caenorhabditis remanei
CRE16913
N
0.816
CRE27979
Caenorhabditis remanei
CRE27979
N
0.816
RBPJ
Homo sapiens
ENSG00000168214
D
0.812
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.810
CJA05333
Caenorhabditis japonica
CJA05333
N
0.796
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
CBN18395
Caenorhabditis brenneri
CBN18395
N
0.739
CGOC_0000554601
Cylicostephanus goldi
CGOC_0000554601
N
0.717
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.707
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.707
HCOI00218000
Haemonchus contortus
HCOI00218000
N
0.701
HCOI01422600
Haemonchus contortus
HCOI01422600
N
0.701
HPLM_0000748001
Haemonchus placei
HPLM_0000748001
N
0.701