GA25242 (Drosophila pseudoobscura)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 FBgn0246623 T166158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		1.000 1.000
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		1.000 1.000
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.794 0.794
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.794 0.794
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.794 0.794
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.794 0.794
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.794 0.794
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.794 0.794
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.794 0.794
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.794 0.794
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.794 0.794
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.794 0.794
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0279010 CSL 119 249

Links

Other CSL family TFs
Other Drosophila pseudoobscura TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HAND2 Homo sapiens ENSG00000164107 D
CpipJ_CPIJ009732 Culex pipiens CpipJ_CPIJ009732 I
AAEL002423 Aedes aegypti AAEL002423 I
ACEP24088 Atta cephalotes ACEP24088 I
ACYPI009244 Acyrthosiphon pisum ACYPI009244 I
AGAP004386 Anopheles gambiae AGAP004386 I
CGI_10023955 Crassostrea gigas CGI_10023955 I
CPIJ009732 Culex quinquefasciatus CPIJ009732 I
ENSAMEG00000014235 Ailuropoda melanoleuca ENSAMEG00000014235 I
ENSAMXG00000025833 Astyanax mexicanus ENSAMXG00000025833 I
HAND2 Bos taurus ENSBTAG00000044123 I
HAND2 Canis familiaris ENSCAFG00000007858 I
HAND2 Callithrix jacchus ENSCJAG00000005144 I
ENSCPOG00000001740 Cavia porcellus ENSCPOG00000001740 I
ENSCSAG00000003094 Chlorocebus sabaeus ENSCSAG00000003094 I
hand2 Danio rerio ENSDARG00000008305 I
HAND2 Dasypus novemcinctus ENSDNOG00000035702 I
Hand2 Dipodomys ordii ENSDORG00000007304 I
HAND2 Equus caballus ENSECAG00000009657 I
ENSFALG00000011490 Ficedula albicollis ENSFALG00000011490 I
HAND2 Felis catus ENSFCAG00000031585 I
hand2 Gasterosteus aculeatus ENSGACG00000016418 I
HAND2 Gorilla gorilla ENSGGOG00000006147 I
ENSGMOG00000018978 Gadus morhua ENSGMOG00000018978 I
ENSLACG00000004329 Latimeria chalumnae ENSLACG00000004329 I
HAND2 Loxodonta africana ENSLAFG00000029843 I
ENSLOCG00000012444 Lepisosteus oculatus ENSLOCG00000012444 I
ENSLOCG00000013581 Lepisosteus oculatus ENSLOCG00000013581 I
ENSMEUG00000010715 Macropus eugenii ENSMEUG00000010715 I
HAND2 Microcebus murinus ENSMICG00000009054 I
HAND2 Myotis lucifugus ENSMLUG00000002599 I
ENSMMUG00000018749 Macaca mulatta ENSMMUG00000018749 I
HAND2 Monodelphis domestica ENSMODG00000003548 I
ENSMPUG00000001909 Mustela putorius furo ENSMPUG00000001909 I
Hand2 Mus musculus ENSMUSG00000038193 I
ENSNLEG00000006670 Nomascus leucogenys ENSNLEG00000006670 I
ENSOARG00000015352 Ovis aries ENSOARG00000015352 I
ENSOCUG00000016256 Oryctolagus cuniculus ENSOCUG00000016256 I
HAND2 Otolemur garnettii ENSOGAG00000027928 I
ENSONIG00000016059 Oreochromis niloticus ENSONIG00000016059 I
HAND2 Ochotona princeps ENSOPRG00000010154 I
hand2 Oryzias latipes ENSORLG00000010967 I
ENSPANG00000023378 Papio anubis ENSPANG00000023378 I
ENSPFOG00000009546 Poecilia formosa ENSPFOG00000009546 I
ENSPPYG00000015208 Pongo abelii ENSPPYG00000015208 I
HAND2 Pan troglodytes ENSPTRG00000016601 I
ENSSSCG00000009703 Sus scrofa ENSSSCG00000009703 I
ENSSTOG00000023020 Ictidomys tridecemlineatus ENSSTOG00000023020 I
HAND2 Tupaia belangeri ENSTBEG00000007591 I
HAND2 Taeniopygia guttata ENSTGUG00000006281 I
hand2 Tetraodon nigroviridis ENSTNIG00000005584 I
HAND2 Tursiops truncatus ENSTTRG00000001365 I
HAND2 Vicugna pacos ENSVPAG00000006724 I
ENSXMAG00000015868 Xiphophorus maculatus ENSXMAG00000015868 I
GB46056 Apis mellifera GB46056 I
ISCW009436 Ixodes scapularis ISCW009436 I
L798_02599 Zootermopsis nevadensis L798_02599 I
LotgiG104540 Lottia gigantea LotgiG104540 I
NV12516 Nasonia vitripennis NV12516 I
PHUM088400 Pediculus humanus PHUM088400 I
RPRC005573 Rhodnius prolixus RPRC005573 I
SINV12583 Solenopsis invicta SINV12583 I
SMAR011914 Strigamia maritima SMAR011914 I
SMAR012521 Strigamia maritima SMAR012521 I
tetur18g03540 Tetranychus urticae tetur18g03540 I
Aan_R004859 Calypte anna Aan_R004859 I
Alligator_sinensis_CCG007905.1 Alligator sinensis Alligator_sinensis_CCG007905.1 I
Cflo_05798--XP_001122645.1_APIME Camponotus floridanus Cflo_05798--XP_001122645.1_APIME I
Cmyd_10016492 Chelonia mydas Cmyd_10016492 I
ENSP00000352565-D1 Bos grunniens ENSP00000352565-D1 I
Gfo_R010505 Geospiza fortis Gfo_R010505 I
Hsal_12649--XP_001122645.1_APIME Harpegnathos saltator Hsal_12649--XP_001122645.1_APIME I
Ogr14661 Ophisaurus gracilis Ogr14661 I
e_gw.829.7.1 Branchiostoma floridae e_gw.829.7.1 I
estExt_fgenesh2_pm.C_20027 Branchiostoma floridae estExt_fgenesh2_pm.C_20027 I
Ocbimv22024043m.g Octopus bimaculoides Ocbimv22024043m.g I
Sakowv30003804m.g Saccoglossus kowalevskii Sakowv30003804m.g I
CLEC007932 Cimex lectularius CLEC007932 I
HHAL010291-PA Halyomorpha halys HHAL010291-PA I
hand2 Xenopus tropicalis XB-GENE-481426 I
hand2.S Xenopus laevis XB-GENE-6252408 I
hand2.L Xenopus laevis XB-GENE-865126 I
AALB002515 Anopheles albimanus AALB002515 I
AARA005336 Anopheles arabiensis AARA005336 I
AATE010223 Anopheles atroparvus AATE010223 I
ACHR001840 Anopheles christyi ACHR001840 I
ACOM029750 Anopheles coluzzii ACOM029750 I
ACUA000831 Anopheles culicifacies ACUA000831 I
ADIR005442 Anopheles dirus ADIR005442 I
AEPI007770 Anopheles epiroticus AEPI007770 I
AFAF019328 Anopheles farauti AFAF019328 I
AFUN005909 Anopheles funestus AFUN005909 I
AMAM001941 Anopheles maculatus AMAM001941 I
AMEC002742 Anopheles melas AMEC002742 I
AMEM001490 Anopheles merus AMEM001490 I
AMIN004773 Anopheles minimus AMIN004773 I
AQUA008454 Anopheles quadriannulatus AQUA008454 I
ASIS021599 Anopheles sinensis ASIS021599 I
ASTEI10695 Anopheles stephensi ASTEI10695 I
LLOJ007342 Lutzomyia longipalpis LLOJ007342 I
PPAI010228 Phlebotomus papatasi PPAI010228 I