CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MELLADRAFT_116290
(
Melampsora laricipopulina
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
MELLADRAFT_116290
T166206_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG07458
CSL
477
635
VLVLSGKVAQKSYGAEKRFLCPPPSALLLGCSWWSAAEADPRRPIGNHRVALVPPTTIISMSGEQSMPSEAYSEWMSMSGHVVGDQASLDDVVIAGRCVGKQLHISEVDEKTKRVEALVKVIGPGFGSPEHRHIGTFPSRPIKVISKPSKKRQSIKNLD
Links
Other
CSL
family TFs
Other
Melampsora laricipopulina
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Homo sapiens
ENSG00000168214
D
0.750
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.722
GLOINDRAFT_27407
Rhizophagus irregularis
GLOINDRAFT_27407
N
0.737
PGTG_09016
Puccinia graminis
PGTG_09016
N
0.873
PGTG_18855
Puccinia graminis
PGTG_18855
N
0.873
PTTG_03030
Puccinia triticina
PTTG_03030
N
0.816