CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Dasypus novemcinctus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSDNOG00000035206
T167935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000023695
CxxC
33
79
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
ENSDNOP00000033081
CxxC
55
101
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Dasypus novemcinctus
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.000
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.000
SapurV1A.0841s0060
Salix purpurea
SapurV1A.0841s0060
N
0.000
SapurV1A.0168s0020
Salix purpurea
SapurV1A.0168s0020
N
0.000
orange1.1g040954m.g
Citrus sinensis
orange1.1g040954m.g
N
0.000
orange1.1g016319m.g
Citrus sinensis
orange1.1g016319m.g
N
0.000
MDP0000574910
Malus domestica
MDP0000574910
N
0.000
MDP0000313526
Malus domestica
MDP0000313526
N
0.000
Lus10016758.g
Linum usitatissimum
Lus10016758.g
N
0.000
Gorai.001G059600
Gossypium raimondii
Gorai.001G059600
N
0.000
gene06360-v1.0-hybrid
Fragaria vesca
gene06360-v1.0-hybrid
N
0.000
gene06358-v1.0-hybrid
Fragaria vesca
gene06358-v1.0-hybrid
N
0.000
Ciclev10018763m.g
Citrus clementina
Ciclev10018763m.g
N
0.000
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.000
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.000
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.000
mgf010338m
Mimulus guttatus
mgf010338m
N
0.000
Cucsa.157420
Cucumis sativus
Cucsa.157420
N
0.000
Pm024489
Prunus mume
Pm024489
N
0.000
Cla019560
Citrullus lanatus
Cla019560
N
0.000
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.000
PRUPE_ppa001238mg
Prunus persica
PRUPE_ppa001238mg
N
0.000
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.000
Bra038629
Brassica rapa
Bra038629
N
0.000
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.000