Alligator_sinensis_CCG018976.1 (Alligator sinensis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Alligator_sinensis_CCG018976.1 T168571_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BAD93120.1_CONSTRUCT
M01919_2.00 		PBM CONSTRUCTS
NNNBCGN
NCGVNNN		 PBM
Weirauch et al.(2014)
pTH7032 		0.979 0.979
CXXC1
M10428_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CGBP_01 		0.979 0.979
CXXC1
M10429_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CGBP_02 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018976.1 CxxC 182 230

Links

Other CxxC family TFs
Other Alligator sinensis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__1893__AT5G59450.1 Arabidopsis lyrata fgenesh2_kg.8__1893__AT5G59450.1 N
Thhalv10013016m.g Eutrema salsugineum Thhalv10013016m.g N
Carubv10028208m.g Capsella rubella Carubv10028208m.g N
Carubv10016909m.g Capsella rubella Carubv10016909m.g N
Cagra.1317s0069 Capsella grandiflora Cagra.1317s0069 N
Cagra.0448s0009 Capsella grandiflora Cagra.0448s0009 N
Bostr.26833s0299 Boechera stricta Bostr.26833s0299 N
Bostr.18473s0299 Boechera stricta Bostr.18473s0299 N
scaffold_501562.1 Arabidopsis lyrata scaffold_501562.1 N
SCL30 Arabidopsis thaliana AT3G46600 N
Bra033813 Brassica rapa Bra033813 N
Bra002564 Brassica rapa Bra002564 N
Bo9g139410 Brassica oleracea Bo9g139410 N
Bo3g132720 Brassica oleracea Bo3g132720 N
Bo3g132680 Brassica oleracea Bo3g132680 N
Bo1g070830 Brassica oleracea Bo1g070830 N
SCL11 Arabidopsis thaliana AT5G59450 N