CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_FBXL19_10014496
(
Myotis brandtii
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
Myotis_brandtii_FBXL19_10014496
T168624_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_FBXL19_10014496
CxxC
104
150
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Myotis brandtii
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022583
Oryza indica
BGIOSGA022583
N
F775_22128
Aegilops tauschii
F775_22128
N
LPERR01G26350
Leersia perrieri
LPERR01G26350
N
LPERR02G12330
Leersia perrieri
LPERR02G12330
N
OB01G10540
Oryza brachyantha
OB01G10540
N
OBART06G08210
Oryza barthii
OBART06G08210
N
OGLUM06G08790
Oryza glumaepatula
OGLUM06G08790
N
OLONG_012955
Oryza longistaminata
OLONG_012955
N
ONIVA06G09490
Oryza nivara
ONIVA06G09490
N
OPUNC06G07980
Oryza punctata
OPUNC06G07980
N
ORGLA06G0078200
Oryza glaberrima
ORGLA06G0078200
N
ORUFI06G08550
Oryza rufipogon
ORUFI06G08550
N
HAZ1
Oryza sativa
OS06G0229300
N
Pavir.Ea02883
Panicum virgatum
Pavir.Ea02883
N