CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dnmt1
(
Xenopus tropicalis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
XB-GENE-965562
T168704_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DNMT1
M01913_2.00
Homo sapiens
NNNNNCGGNN
NNCCGNNNNN
PBM
Weirauch et al.(2014)
pTH7029
0.787
0.787
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002934384
CxxC
520
566
ENGIKRRRCGVCEVCQQPDCGQCKACQDMLKFGGAGRTKQACTQRRC
Links
Other
CxxC
family TFs
Other
Xenopus tropicalis
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
sna
Drosophila melanogaster
FBgn0003448
D
0.000
GA17803
Drosophila pseudoobscura
FBgn0077812
I
0.000
GF14523
Drosophila ananassae
FBgn0091550
I
0.000
GG24206
Drosophila erecta
FBgn0116338
I
0.000
GH22585
Drosophila grimshawi
FBgn0130043
I
0.000
GI22640
Drosophila mojavensis
FBgn0145368
I
0.000
GL26593
Drosophila persimilis
FBgn0164175
I
0.000
GM14336
Drosophila sechellia
FBgn0169261
I
0.000
GD21953
Drosophila simulans
FBgn0193368
I
0.000
GJ23192
Drosophila virilis
FBgn0210294
I
0.000
GK18251
Drosophila willistoni
FBgn0220250
I
0.000
GE19401
Drosophila yakuba
FBgn0236744
I
0.000
LCUP006861
Lucilia cuprina
LCUP006861
I
0.000
MDOA012986
Musca domestica
MDOA012986
I
0.000