CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GE19401 *(Drosophila yakuba)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0236744	T117021_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
sna M03670_2.00	Drosophila melanogaster	TRCACCTGTYVB	VBRACAGGTGYA	SELEX Nitta et al.(2015) sna_1	0.827	1.000
sna M05862_2.00	Drosophila melanogaster	NNVCACCTGTYNN	NNRACAGGTGBNN	SMiLE-seq Isakova et al.(2017) Sna	0.827	1.000
sna M06069_2.00	Drosophila melanogaster	SMACYTGYBN	NVRCARGTKS	B1H Zhu et al.(2011) sna_FlyReg_FBgn0003448	0.827	1.000
sna M06070_2.00	Drosophila melanogaster	SCACCTGWYV	BRWCAGGTGS	B1H Zhu et al.(2011) sna_SANGER_10_FBgn0003448	0.827	1.000
sna M06071_2.00	Drosophila melanogaster	MCACCTGTYVHNNN	NNNDBRACAGGTGK	B1H Zhu et al.(2011) sna_SOLEXA_5_FBgn0003448	0.827	1.000
sna M09664_2.00	Drosophila melanogaster	VMACCTGYB	VRCAGGTKB	Misc Kulakovskiy et al.(2009) sna	0.827	1.000
sna M10375_2.00	Drosophila melanogaster	NKRCACCTGTYNB	VNRACAGGTGYMN	Transfac Matys et al.(2006) I$SN_01	0.827	1.000
sna M10376_2.00	Drosophila melanogaster	WSBHADCAVSTKSK	MSMASBTGHTDVSW	Transfac Matys et al.(2006) I$SN_02	0.827	1.000
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Drosophila yakuba* TFs