CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE30013
(
Caenorhabditis remanei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CRE30013
T168943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.946
0.956
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE30013
DM
28
72
KRLTCRKCEGHGLYAILKGHAGVCPYKDCSCGTCASVMSMRANAL
Links
Other
DM
family TFs
Other
Caenorhabditis remanei
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
dmd-9
Caenorhabditis elegans
WBGene00022060
D
0.946
NBR_0000615901
Nippostrongylus brasiliensis
NBR_0000615901
I
0.910
HCOI01956800
Haemonchus contortus
HCOI01956800
I
0.863
HPBE_0000455001
Heligmosomoides bakeri
HPBE_0000455001
I
0.910
HPLM_0000698001
Haemonchus placei
HPLM_0000698001
I
0.910
L596_g25360
Steinernema carpocapsae
L596_g25360
I
0.856
L889_g19153
Steinernema feltiae
L889_g19153
I
0.867
L892_g27590
Steinernema scapterisci
L892_g27590
I
0.856
L893_g6833
Steinernema glaseri
L893_g6833
I
0.847
L898_g6334
Steinernema monticolum
L898_g6334
I
0.847
HCOI00602900
Haemonchus contortus
HCOI00602900
I
0.863
NBR_0000982201
Nippostrongylus brasiliensis
NBR_0000982201
I
0.863
NECAME_02595
Necator americanus
NECAME_02595
I
0.910
NECAME_08769
Necator americanus
NECAME_08769
I
0.863
OESDEN_12332
Oesophagostomum dentatum
OESDEN_12332
I
0.855
scaffold54-EXSNAP2012.9
Pristionchus exspectatus
scaffold54-EXSNAP2012.9
I
0.868
SMUV_0001084001
Syphacia muris
SMUV_0001084001
I
0.857
SVUK_0000682301
Strongylus vulgaris
SVUK_0000682301
I
0.909
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.946
HCOI00493000
Haemonchus contortus
HCOI00493000
I
0.910
Hba_20459
Heterorhabditis bacteriophora
Hba_20459
I
0.860
Hba_03543
Heterorhabditis bacteriophora
Hba_03543
I
0.909
EVEC_0001300201
Enterobius vermicularis
EVEC_0001300201
I
0.852
CGOC_0001138001
Cylicostephanus goldi
CGOC_0001138001
I
0.910
BXY_0004500
Bursaphelenchus xylophilus
BXY_0004500
I
0.865
ASU_04764
Ascaris suum
ASU_04764
I
0.865
ASIM_0001248901
Anisakis simplex
ASIM_0001248901
I
0.865
ANCCEY_11797
Ancylostoma ceylanicum
ANCCEY_11797
I
0.863
ANCCAN_12400
Ancylostoma caninum
ANCCAN_12400
I
0.910
ACOC_0000878601
Angiostrongylus costaricensis
ACOC_0000878601
I
0.863
ACAC_0000297301
Angiostrongylus cantonensis
ACAC_0000297301
I
0.890
PPA11400
Pristionchus pacificus
PPA11400
I
0.868
CRE30014
Caenorhabditis remanei
CRE30014
I
0.949
CJA18545
Caenorhabditis japonica
CJA18545
I
0.927