CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000615901
(
Nippostrongylus brasiliensis
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
NBR_0000615901
T169916_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.908
0.711
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000615901-mRNA-1
DM
22
66
KRLTCRKCEGHGFISVLKGHAAVCPFNECNCERCSSVMSMRANAL
Links
Other
DM
family TFs
Other
Nippostrongylus brasiliensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_12400
Ancylostoma caninum
ANCCAN_12400
I
0.946
CGOC_0001138001
Cylicostephanus goldi
CGOC_0001138001
I
0.946
HCOI00493000
Haemonchus contortus
HCOI00493000
I
0.946
HPBE_0000455001
Heligmosomoides bakeri
HPBE_0000455001
I
0.946
HPLM_0000698001
Haemonchus placei
HPLM_0000698001
I
0.946
NECAME_02595
Necator americanus
NECAME_02595
I
0.946
Hba_03543
Heterorhabditis bacteriophora
Hba_03543
I
0.943
SVUK_0000682301
Strongylus vulgaris
SVUK_0000682301
I
0.943
ACAC_0000297301
Angiostrongylus cantonensis
ACAC_0000297301
I
0.925
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.916
CRE30013
Caenorhabditis remanei
CRE30013
I
0.910
CRE30014
Caenorhabditis remanei
CRE30014
I
0.910
dmd-9
Caenorhabditis elegans
WBGene00022060
D
0.908
CJA18545
Caenorhabditis japonica
CJA18545
I
0.894