ENSFALG00000005353 (Ficedula albicollis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 ENSFALG00000005353 T169037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.965 1.000
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.965 0.979
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.965 0.979
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.965 0.979
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.965 0.979
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.965 0.957
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.965 0.957
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.965 0.957
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.956 0.936
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.934 0.787
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.934 0.830
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.934 0.830
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.933 0.787
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.933 0.787
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.933 0.787
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.933 0.787
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.933 0.787
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.932 0.851
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.932 0.851
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.932 0.851
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.932 0.851
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.930 0.787
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.900 0.702
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.900 0.702
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.877 0.638
ENSMODG00000010059
M01932_2.00 		Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN		 PBM
Weirauch et al.(2014)
pTH9215 		0.876 0.638
Dmrtc2
M00789_2.00 		Mus musculus
NNNATGTATHMNN
NNKDATACATNNN		 PBM
Weirauch et al.(2013)
pTH3205 		0.874 0.681
DMRTC2
M04685_2.00 		Homo sapiens
TGTAWCRTTB
VAAYGWTACA		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1 		0.874 0.681
DMRTC2
M04686_2.00 		Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2 		0.874 0.681
DMRTC2
M04688_2.00 		Homo sapiens
TGTATCGTTC
GAACGATACA		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1 		0.874 0.681
DMRTC2
M04689_2.00 		Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2 		0.874 0.681
DMRTC2
M10432_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT7_01 		0.874 0.681
DMRTC2
M04687_2.00 		Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX 		0.874 0.681
DMRTC2
M04690_2.00 		Homo sapiens
YGTATCGTTY
RAACGATACR		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1 		0.874 0.681
DMRTC2
M04691_2.00 		Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2 		0.874 0.681
DMRTC2
M01926_2.00 		Cavia porcellus
NNHDWNDN
NHNWHDNN		 PBM
Weirauch et al.(2014)
pTH9250 		0.873 0.660
ENSOANG00000013938
M01933_2.00 		Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN		 PBM
Weirauch et al.(2014)
pTH9271 		0.860 0.638
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.859 0.638
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.859 0.638
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000005576 DM 7 53

Links

Other DM family TFs
Other Ficedula albicollis TFs

653 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00001p00272070 Amborella trichopoda AMTR_s00001p00272070 N
AMTR_s00008p00198780 Amborella trichopoda AMTR_s00008p00198780 N
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N
AT1G22490 Arabidopsis thaliana AT1G22490 N
BHLH96 Arabidopsis thaliana AT1G72210 N
FAMA Arabidopsis thaliana AT3G24140 N
BGIOSGA030936 Oryza indica BGIOSGA030936 N
Bo1g101110 Brassica oleracea Bo1g101110 N
Bo3g082010 Brassica oleracea Bo3g082010 N
Bo5g038570 Brassica oleracea Bo5g038570 N
Bo6g092570 Brassica oleracea Bo6g092570 N
Bo7g037540 Brassica oleracea Bo7g037540 N
Bo7g057920 Brassica oleracea Bo7g057920 N
Bo8g071490 Brassica oleracea Bo8g071490 N
Bra001929 Brassica rapa Bra001929 N
Bra003886 Brassica rapa Bra003886 N
Bra012329 Brassica rapa Bra012329 N
Bra016080 Brassica rapa Bra016080 N
Bra016377 Brassica rapa Bra016377 N
Bra028357 Brassica rapa Bra028357 N
Bra040856 Brassica rapa Bra040856 N
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N
GLYMA01G23230 Glycine max GLYMA01G23230 N
GLYMA02G14290 Glycine max GLYMA02G14290 N
GLYMA02G37313 Glycine max GLYMA02G37313 N
GLYMA03G39990 Glycine max GLYMA03G39990 N
GLYMA04G10630 Glycine max GLYMA04G10630 N
GLYMA06G10470 Glycine max GLYMA06G10470 N
GLYMA06G35330 Glycine max GLYMA06G35330 N
GLYMA08G36590 Glycine max GLYMA08G36590 N
GLYMA10G29760 Glycine max GLYMA10G29760 N
GLYMA14G35560 Glycine max GLYMA14G35560 N
GLYMA19G42520 Glycine max GLYMA19G42520 N
GLYMA20G37550 Glycine max GLYMA20G37550 N
GRMZM2G006631 Zea mays GRMZM2G006631 N
GRMZM2G015666 Zea mays GRMZM2G015666 N
GRMZM2G082586 Zea mays GRMZM2G082586 N
GRMZM2G086474 Zea mays GRMZM2G086474 N
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N
GSMUA_Achr5G05450_001 Musa acuminata GSMUA_Achr5G05450_001 N
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N
MLOC_21759 Hordeum vulgare MLOC_21759 N
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N
MTR_1g082480 Medicago truncatula MTR_1g082480 N
MTR_3g099620 Medicago truncatula MTR_3g099620 N
MTR_7g113830 Medicago truncatula MTR_7g113830 N
MTR_8g066770 Medicago truncatula MTR_8g066770 N
OB09G19960 Oryza brachyantha OB09G19960 N
OMERI09G10430 Oryza meridionalis OMERI09G10430 N
ONIVA09G13890 Oryza nivara ONIVA09G13890 N
OPUNC09G11790 Oryza punctata OPUNC09G11790 N
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N
OS09G0468700 Oryza sativa OS09G0468700 N
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N
Sb02g027210 Sorghum bicolor Sb02g027210 N
FMA Arabidopsis lyrata scaffold_302925.1 N
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N
Si013925m.g Setaria italica Si013925m.g N
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N
TCM_015694 Theobroma cacao TCM_015694 N
TCM_020336 Theobroma cacao TCM_020336 N
TCM_026599 Theobroma cacao TCM_026599 N
TCM_034439 Theobroma cacao TCM_034439 N
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N
TRIUR3_09788 Triticum urartu TRIUR3_09788 N
FMA Vitis vinifera VIT_05s0029g00050 N
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N
Ca_01181 Cicer arietinum Ca_01181 N
Ca_03703 Cicer arietinum Ca_03703 N
Ca_12363 Cicer arietinum Ca_12363 N
Ca_16010 Cicer arietinum Ca_16010 N
Ca_28086 Cicer arietinum Ca_28086 N
Cla005338 Citrullus lanatus Cla005338 N
Cla016479 Citrullus lanatus Cla016479 N
Cla020173 Citrullus lanatus Cla020173 N
Cla021744 Citrullus lanatus Cla021744 N
Cla022458 Citrullus lanatus Cla022458 N
Pm003380 Prunus mume Pm003380 N
Pm004489 Prunus mume Pm004489 N
Pm009474 Prunus mume Pm009474 N
Pm023207 Prunus mume Pm023207 N
29904.m002956 Ricinus communis 29904.m002956 N
30054.m000819 Ricinus communis 30054.m000819 N
30128.m008737 Ricinus communis 30128.m008737 N
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N
cassava27750.m1 Manihot esculenta cassava27750.m1 N
cassava27856.m1 Manihot esculenta cassava27856.m1 N
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N
Cucsa.091670 Cucumis sativus Cucsa.091670 N
Cucsa.160250 Cucumis sativus Cucsa.160250 N
Cucsa.163550 Cucumis sativus Cucsa.163550 N
Cucsa.256420 Cucumis sativus Cucsa.256420 N
Cucsa.313010 Cucumis sativus Cucsa.313010 N
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N
estExt_gwp_gw1.C_710125 Physcomitrella patens estExt_gwp_gw1.C_710125 N
mgf015694m Mimulus guttatus mgf015694m N
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N
Aquca_010_00112 Aquilegia coerulea Aquca_010_00112 N
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N
Bostr.13404s0054 Boechera stricta Bostr.13404s0054 N
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N
Carubv10011476m.g Capsella rubella Carubv10011476m.g N
Carubv10013821m.g Capsella rubella Carubv10013821m.g N
Carubv10020657m.g Capsella rubella Carubv10020657m.g N
Carubv10021596m.g Capsella rubella Carubv10021596m.g N
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N
Lus10000332.g Linum usitatissimum Lus10000332.g N
Lus10007139.g Linum usitatissimum Lus10007139.g N
Lus10016680.g Linum usitatissimum Lus10016680.g N
Lus10029950.g Linum usitatissimum Lus10029950.g N
MDP0000267178 Malus domestica MDP0000267178 N
MDP0000646823 Malus domestica MDP0000646823 N
MDP0000672131 Malus domestica MDP0000672131 N
MDP0000794913 Malus domestica MDP0000794913 N
MDP0000944210 Malus domestica MDP0000944210 N
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N
Pavir.Ba01963 Panicum virgatum Pavir.Ba01963 N
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N
Pavir.J22933 Panicum virgatum Pavir.J22933 N
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N
Thhalv10002990m.g Eutrema salsugineum Thhalv10002990m.g N
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N
Thhalv10023998m.g Eutrema salsugineum Thhalv10023998m.g N
PK04856.1 Cannabis sativa PK04856.1 N
PK14736.1 Cannabis sativa PK14736.1 N
PK21294.1 Cannabis sativa PK21294.1 N
PK28391.1 Cannabis sativa PK28391.1 N
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N