CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dmd-9
(
Caenorhabditis elegans
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
WBGene00022060
T169440_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.845
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00661_2.00
DM
27
71
KKLTCRKCEGHGTYAILKGHAGVCPYKDCSCGTCASVMSMRANAL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y67D8A.3
DM
27
71
KKLTCRKCEGHGTYAILKGHAGVCPYKDCSCGTCASVMSMRANAL
Links
Other
DM
family TFs
Other
Caenorhabditis elegans
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000615901
Nippostrongylus brasiliensis
NBR_0000615901
I
0.908
HCOI01956800
Haemonchus contortus
HCOI01956800
I
0.855
HPBE_0000455001
Heligmosomoides bakeri
HPBE_0000455001
I
0.908
HPLM_0000698001
Haemonchus placei
HPLM_0000698001
I
0.908
L596_g25360
Steinernema carpocapsae
L596_g25360
I
0.857
L889_g19153
Steinernema feltiae
L889_g19153
I
0.859
L892_g27590
Steinernema scapterisci
L892_g27590
I
0.857
L893_g6833
Steinernema glaseri
L893_g6833
I
0.849
L898_g6334
Steinernema monticolum
L898_g6334
I
0.849
HCOI00602900
Haemonchus contortus
HCOI00602900
I
0.855
NBR_0000982201
Nippostrongylus brasiliensis
NBR_0000982201
I
0.855
NECAME_02595
Necator americanus
NECAME_02595
I
0.908
NECAME_08769
Necator americanus
NECAME_08769
I
0.855
OESDEN_12332
Oesophagostomum dentatum
OESDEN_12332
I
0.853
scaffold54-EXSNAP2012.9
Pristionchus exspectatus
scaffold54-EXSNAP2012.9
I
0.870
SMUV_0001084001
Syphacia muris
SMUV_0001084001
I
0.859
SVUK_0000682301
Strongylus vulgaris
SVUK_0000682301
I
0.906
ASIM_0001248901
Anisakis simplex
ASIM_0001248901
I
0.867
CJA18545
Caenorhabditis japonica
CJA18545
I
0.923
CRE30013
Caenorhabditis remanei
CRE30013
I
0.946
CRE30014
Caenorhabditis remanei
CRE30014
I
0.946
PPA11400
Pristionchus pacificus
PPA11400
I
0.870
ACAC_0000297301
Angiostrongylus cantonensis
ACAC_0000297301
I
0.887
ACOC_0000878601
Angiostrongylus costaricensis
ACOC_0000878601
I
0.855
ANCCAN_12400
Ancylostoma caninum
ANCCAN_12400
I
0.908
ANCCEY_11797
Ancylostoma ceylanicum
ANCCEY_11797
I
0.855
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.942
ASU_04764
Ascaris suum
ASU_04764
I
0.867
BXY_0004500
Bursaphelenchus xylophilus
BXY_0004500
I
0.867
CGOC_0001138001
Cylicostephanus goldi
CGOC_0001138001
I
0.908
EVEC_0001300201
Enterobius vermicularis
EVEC_0001300201
I
0.854
Hba_03543
Heterorhabditis bacteriophora
Hba_03543
I
0.906
Hba_20459
Heterorhabditis bacteriophora
Hba_20459
I
0.852
HCOI00493000
Haemonchus contortus
HCOI00493000
I
0.908