CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08649
(
Acanthocheilonema viteae
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
nAv.1.0.1.g08649
T169910_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-8
M00660_2.00
Caenorhabditis elegans
TGTTGMAAWN
NWTTKCAACA
PBM
Narasimhan et al.(2015)
pTH10837
0.863
0.652
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08649-RA
DM
22
65
KRHCGMCRQHGMLVETRGHHCKRKNCNCLRCLLIRQRRKIMSTQ
nAv.1.0.1.t08649-RA
DM
116
160
QCYICQKCKNHGVLVWKKEHKRHCLYANCKCDQCELIEKRRKLDQ
Links
Other
DM
family TFs
Other
Acanthocheilonema viteae
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy