CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dmd-8
(
Caenorhabditis elegans
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
WBGene00020708
T169439_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-8
M00660_2.00
Caenorhabditis elegans
TGTTGMAAWN
NWTTKCAACA
PBM
Narasimhan et al.(2015)
pTH10837
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.845
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00660_2.00
DM
48
91
KRHCGMCKQHGVFVETRGHTCEYRSCECEQCDLVRKRREIMSTQ
M00660_2.00
DM
134
178
CYFCQKCKNHNVLVWKKNHKKECQYSSCECQQCNLIDSRRALDRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T22H9.4
DM
48
91
KRHCGMCKQHGVFVETRGHTCEYRSCECEQCDLVRKRREIMSTQ
T22H9.4
DM
134
178
CYFCQKCKNHNVLVWKKNHKKECQYSSCECQQCNLIDSRRALDRH
Links
Other
DM
family TFs
Other
Caenorhabditis elegans
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE08815
Caenorhabditis remanei
CRE08815
I
0.963
CBN09492
Caenorhabditis brenneri
CBN09492
I
0.960
CJA09451
Caenorhabditis japonica
CJA09451
I
0.960
CBG01382
Caenorhabditis briggsae
CBG01382
I
0.959
CBN29810
Caenorhabditis brenneri
CBN29810
I
0.956
HPBE_0001572101
Heligmosomoides bakeri
HPBE_0001572101
I
0.932
HPLM_0000403401
Haemonchus placei
HPLM_0000403401
I
0.932
Hba_11006
Heterorhabditis bacteriophora
Hba_11006
I
0.927
ANCCEY_09710
Ancylostoma ceylanicum
ANCCEY_09710
I
0.926
NECAME_09584
Necator americanus
NECAME_09584
I
0.925
SVUK_0000327101
Strongylus vulgaris
SVUK_0000327101
I
0.925
ANCCAN_04748
Ancylostoma caninum
ANCCAN_04748
I
0.924
PPA14239
Pristionchus pacificus
PPA14239
I
0.907
scaffold1063-EXSNAP2012.7
Pristionchus exspectatus
scaffold1063-EXSNAP2012.7
I
0.907
L892_g20637
Steinernema scapterisci
L892_g20637
I
0.906
L596_g1691
Steinernema carpocapsae
L596_g1691
I
0.904
L889_g31510
Steinernema feltiae
L889_g31510
I
0.904
L893_g13923
Steinernema glaseri
L893_g13923
I
0.904
DICVIV_01396
Dictyocaulus viviparus
DICVIV_01396
I
0.900
TELCIR_22084
Teladorsagia circumcincta
TELCIR_22084
I
0.897
BXY_0544800
Bursaphelenchus xylophilus
BXY_0544800
I
0.886
EVEC_0001219101
Enterobius vermicularis
EVEC_0001219101
I
0.872
SSTP_0001193100
Strongyloides stercoralis
SSTP_0001193100
I
0.870
SPAL_0000741800
Strongyloides papillosus
SPAL_0000741800
I
0.868
SVE_1023400
Strongyloides venezuelensis
SVE_1023400
I
0.868
PTRK_0000045900
Parastrongyloides trichosuri
PTRK_0000045900
I
0.866
nAv.1.0.1.g08649
Acanthocheilonema viteae
nAv.1.0.1.g08649
I
0.863
LOAG_04009
Loa loa
LOAG_04009
I
0.860
Bm5937
Brugia malayi
Bm5937
I
0.857
BTMF_0000940801
Brugia timori
BTMF_0000940801
I
0.857