CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HPLM_0000403401
(
Haemonchus placei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
HPLM_0000403401
T169835_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-8
M00660_2.00
Caenorhabditis elegans
TGTTGMAAWN
NWTTKCAACA
PBM
Narasimhan et al.(2015)
pTH10837
0.932
0.742
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000403401-mRNA-1
DM
30
73
KRHCGMCRQHGVVVETRGHICQFKNCECDKCKLVRKRRSIMSTQ
HPLM_0000403401-mRNA-1
DM
113
157
CYFCQKCKNHGVLMWKKDHKRSCEYANCRCEQCDLIDTRRALDRH
Links
Other
DM
family TFs
Other
Haemonchus placei
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPBE_0001572101
Heligmosomoides bakeri
HPBE_0001572101
I
0.960
NECAME_09584
Necator americanus
NECAME_09584
I
0.959
SVUK_0000327101
Strongylus vulgaris
SVUK_0000327101
I
0.959
ANCCEY_09710
Ancylostoma ceylanicum
ANCCEY_09710
I
0.958
ANCCAN_04748
Ancylostoma caninum
ANCCAN_04748
I
0.957
Hba_11006
Heterorhabditis bacteriophora
Hba_11006
I
0.953
TELCIR_22084
Teladorsagia circumcincta
TELCIR_22084
I
0.947
DICVIV_01396
Dictyocaulus viviparus
DICVIV_01396
I
0.940
scaffold1063-EXSNAP2012.7
Pristionchus exspectatus
scaffold1063-EXSNAP2012.7
I
0.937
PPA14239
Pristionchus pacificus
PPA14239
I
0.937
CRE08815
Caenorhabditis remanei
CRE08815
I
0.935
CBG01382
Caenorhabditis briggsae
CBG01382
I
0.934
dmd-8
Caenorhabditis elegans
WBGene00020708
D
0.932
CBN29810
Caenorhabditis brenneri
CBN29810
I
0.929
CBN09492
Caenorhabditis brenneri
CBN09492
I
0.929
CJA09451
Caenorhabditis japonica
CJA09451
I
0.927
L596_g1691
Steinernema carpocapsae
L596_g1691
I
0.924
L893_g13923
Steinernema glaseri
L893_g13923
I
0.924
L889_g31510
Steinernema feltiae
L889_g31510
I
0.924
L892_g20637
Steinernema scapterisci
L892_g20637
I
0.923
SVE_1023400
Strongyloides venezuelensis
SVE_1023400
I
0.899
SSTP_0001193100
Strongyloides stercoralis
SSTP_0001193100
I
0.899
SPAL_0000741800
Strongyloides papillosus
SPAL_0000741800
I
0.899
BXY_0544800
Bursaphelenchus xylophilus
BXY_0544800
I
0.896
ACAC_0000832201
Angiostrongylus cantonensis
ACAC_0000832201
N
0.894
ACOC_0000241101
Angiostrongylus costaricensis
ACOC_0000241101
N
0.894
PTRK_0000045900
Parastrongyloides trichosuri
PTRK_0000045900
I
0.892
NBR_0001674501
Nippostrongylus brasiliensis
NBR_0001674501
N
0.882
maker-nMf.1.1.scaf00497-augustus-gene-0.10
Meloidogyne floridensis
maker-nMf.1.1.scaf00497-augustus-gene-0.10
N
0.877
MhA1_Contig1499.frz3.gene12
Meloidogyne hapla
MhA1_Contig1499.frz3.gene12
N
0.877
GPLIN_001033000
Globodera pallida
GPLIN_001033000
N
0.874
EVEC_0001219101
Enterobius vermicularis
EVEC_0001219101
I
0.874
LOAG_04009
Loa loa
LOAG_04009
I
0.874
nAv.1.0.1.g08649
Acanthocheilonema viteae
nAv.1.0.1.g08649
I
0.872
BTMF_0000940801
Brugia timori
BTMF_0000940801
I
0.869
Bm5937
Brugia malayi
Bm5937
I
0.869
TCLT_0000991301
Thelazia callipaeda
TCLT_0000991301
N
0.854
WBGene00243680
Onchocerca volvulus
WBGene00243680
N
0.847