CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00497-augustus-gene-0.10
(
Meloidogyne floridensis
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
maker-nMf.1.1.scaf00497-augustus-gene-0.10
T169894_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00497-augustus-gene-0.10-mRNA-1
DM
23
66
KRFCGICRQHGKMEETRGHICEFKDCECQKCNLVRSRRLVMSQQ
maker-nMf.1.1.scaf00497-augustus-gene-0.10-mRNA-1
DM
132
176
CYFCQKCKNHGVLVWKKQHKRQCPFTNCSCDFCELIETRRRLDQH
Links
Other
DM
family TFs
Other
Meloidogyne floridensis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig1499.frz3.gene12
Meloidogyne hapla
MhA1_Contig1499.frz3.gene12
N
0.966
GPLIN_001033000
Globodera pallida
GPLIN_001033000
N
0.964
BXY_0544800
Bursaphelenchus xylophilus
BXY_0544800
I
0.934
L596_g1691
Steinernema carpocapsae
L596_g1691
I
0.903
L889_g31510
Steinernema feltiae
L889_g31510
I
0.903
L893_g13923
Steinernema glaseri
L893_g13923
I
0.903
L892_g20637
Steinernema scapterisci
L892_g20637
I
0.902
PPA14239
Pristionchus pacificus
PPA14239
I
0.878
scaffold1063-EXSNAP2012.7
Pristionchus exspectatus
scaffold1063-EXSNAP2012.7
I
0.878
HPBE_0001572101
Heligmosomoides bakeri
HPBE_0001572101
I
0.877
HPLM_0000403401
Haemonchus placei
HPLM_0000403401
I
0.877
NECAME_09584
Necator americanus
NECAME_09584
I
0.870
SVUK_0000327101
Strongylus vulgaris
SVUK_0000327101
I
0.870
ANCCEY_09710
Ancylostoma ceylanicum
ANCCEY_09710
I
0.868
ANCCAN_04748
Ancylostoma caninum
ANCCAN_04748
I
0.865
SPAL_0000741800
Strongyloides papillosus
SPAL_0000741800
I
0.865
SSTP_0001193100
Strongyloides stercoralis
SSTP_0001193100
I
0.865
SVE_1023400
Strongyloides venezuelensis
SVE_1023400
I
0.865
Hba_11006
Heterorhabditis bacteriophora
Hba_11006
I
0.864
PTRK_0000045900
Parastrongyloides trichosuri
PTRK_0000045900
I
0.860
TELCIR_22084
Teladorsagia circumcincta
TELCIR_22084
I
0.846