CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aqu1.229686
(
Amphimedon queenslandica
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
Aqu1.229686
T172290_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.794
0.794
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.794
0.794
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.765
0.765
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PAC:15728214
E2F
157
257
QSKGLRHFSQLVCEKVREKGRTTYNEVADELVKEFGEAERRSGQDGVREKERGIQREEGMKEELQRQIDQKNIRRRVYDALNVLMAMNIINKEKKDIHWIG
Links
Other
E2F
family TFs
Other
Amphimedon queenslandica
TFs
539 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G55690
Arabidopsis thaliana
AT5G55690
N
0.000
AGL82
Arabidopsis thaliana
AT5G58890
N
0.000
Bo3g021400
Brassica oleracea
Bo3g021400
N
0.000
Bo9g135720
Brassica oleracea
Bo9g135720
N
0.000
Bra002611
Brassica rapa
Bra002611
N
0.000
Bra028965
Brassica rapa
Bra028965
N
0.000
fgenesh1_pg.C_scaffold_8001596
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8001596
N
0.000
AGL82
Arabidopsis lyrata
scaffold_802501.1
N
0.000
Bostr.26833s0357
Boechera stricta
Bostr.26833s0357
N
0.000
Bostr.26833s0688
Boechera stricta
Bostr.26833s0688
N
0.000
Cagra.6942s0024
Capsella grandiflora
Cagra.6942s0024
N
0.000
Carubv10027564m.g
Capsella rubella
Carubv10027564m.g
N
0.000
Carubv10027979m.g
Capsella rubella
Carubv10027979m.g
N
0.000
Thhalv10015500m.g
Eutrema salsugineum
Thhalv10015500m.g
N
0.000
Thhalv10015661m.g
Eutrema salsugineum
Thhalv10015661m.g
N
0.000