POPTR_0016s09640 (Populus trichocarpa)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 POPTR_0016s09640 T173430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.794 0.794
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.794 0.794
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.721 0.721
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s09640.1 E2F 101 183

Links

Other E2F family TFs
Other Populus trichocarpa TFs

592 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Med Drosophila melanogaster FBgn0011655 D 0.000
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.000
MDOA012885 Musca domestica MDOA012885 I 0.000
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.000
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.000
AMIN000723 Anopheles minimus AMIN000723 I 0.000
AMEM015931 Anopheles merus AMEM015931 I 0.000
AMAM019778 Anopheles maculatus AMAM019778 I 0.000
AFUN009864 Anopheles funestus AFUN009864 I 0.000
AFAF011208 Anopheles farauti AFAF011208 I 0.000
AEPI002385 Anopheles epiroticus AEPI002385 I 0.000
ADIR002761 Anopheles dirus ADIR002761 I 0.000
ACUA025512 Anopheles culicifacies ACUA025512 I 0.000
ACOM037505 Anopheles coluzzii ACOM037505 I 0.000
ACHR000067 Anopheles christyi ACHR000067 I 0.000
AATE010695 Anopheles atroparvus AATE010695 I 0.000
AARA004719 Anopheles arabiensis AARA004719 I 0.000
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.000
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.000
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.000
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.000
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.000
L898_g26477 Steinernema monticolum L898_g26477 I 0.000
L898_g17086 Steinernema monticolum L898_g17086 I 0.000
L893_g344 Steinernema glaseri L893_g344 I 0.000
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.000
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I 0.000
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.000
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.000
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.000
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.000
LCUP007928 Lucilia cuprina LCUP007928 I 0.000
GM16436 Drosophila sechellia FBgn0171351 I 0.000
GL23637 Drosophila persimilis FBgn0161227 I 0.000
GI23400 Drosophila mojavensis FBgn0146126 I 0.000
GH18642 Drosophila grimshawi FBgn0126109 I 0.000
GG11819 Drosophila erecta FBgn0104114 I 0.000
GF22974 Drosophila ananassae FBgn0099968 I 0.000
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.000
GJ23092 Drosophila virilis FBgn0210194 I 0.000
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.000
CGI_10018464 Crassostrea gigas CGI_10018464 I 0.000
Bm3575 Brugia malayi Bm3575 I 0.000
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.000
AGAP002902 Anopheles gambiae AGAP002902 I 0.000
AAEL013896 Aedes aegypti AAEL013896 I 0.000
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.000
GE10952 Drosophila yakuba FBgn0228782 I 0.000
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.000
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
TC010848 Tribolium castaneum TC010848 I 0.000
SMAR013850 Strigamia maritima SMAR013850 I 0.000
SINV15516 Solenopsis invicta SINV15516 I 0.000
PHUM002670 Pediculus humanus PHUM002670 I 0.000
NV12984 Nasonia vitripennis NV12984 I 0.000
MCINX014520 Melitaea cinxia MCINX014520 I 0.000
LotgiG131078 Lottia gigantea LotgiG131078 I 0.000
L798_13939 Zootermopsis nevadensis L798_13939 I 0.000
KGM_12572 Danaus plexippus KGM_12572 I 0.000
ISCW018468 Ixodes scapularis ISCW018468 I 0.000
HMEL002203 Heliconius melpomene HMEL002203 I 0.000
GB50071 Apis mellifera GB50071 I 0.000
GK11724 Drosophila willistoni FBgn0213735 I 0.000
L596_g8238 Steinernema carpocapsae L596_g8238 N 0.000
L892_g19326 Steinernema scapterisci L892_g19326 N 0.000
L893_g8358 Steinernema glaseri L893_g8358 N 0.000