Gfo_R005557 (Geospiza fortis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Gfo_R005557 T173732_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		1.000 1.000
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		1.000 1.000
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.765 0.765
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005557 E2F 109 190

Links

Other E2F family TFs
Other Geospiza fortis TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pax6.L Xenopus laevis XB-GENE-865046 I
MDOA004921 Musca domestica MDOA004921 N
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N
SPER_0003607601 Spirometra erinaceieuropaei SPER_0003607601 N
SPER_0001686401 Spirometra erinaceieuropaei SPER_0001686401 N
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N
PEQ_0000595901 Parascaris equorum PEQ_0000595901 N
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N
DILT_0001312701 Diphyllobothrium latum DILT_0001312701 N
D918_03763 Trichuris suis D918_03763 N
ACEP15315 Atta cephalotes ACEP15315 N
ASIS006297 Anopheles sinensis ASIS006297 N
AQUA004623 Anopheles quadriannulatus AQUA004623 N
AEPI000661 Anopheles epiroticus AEPI000661 N
ADIR004612 Anopheles dirus ADIR004612 N
ACHR007556 Anopheles christyi ACHR007556 N
fgenesh1_kg.C_scaffold_16000108 Phytophthora capsici fgenesh1_kg.C_scaffold_16000108 N
SMU15026520 Schmidtea mediterranea SMU15026520 N
Sjc_0082940 Schistosoma japonicum Sjc_0082940 N
LOAG_09072 Loa loa LOAG_09072 N
GK24890 Drosophila willistoni FBgn0226849 N
CRE03357 Caenorhabditis remanei CRE03357 N