ebf2 (Takifugu rubripes)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSTRUG00000011528 T174714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.939 0.939
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.861 0.861
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.831 0.831
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.831 0.831
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.831 0.831
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.805 0.805
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.805 0.805
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000029112 EBF1 17 247

Links

Other EBF1 family TFs
Other Takifugu rubripes TFs

356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GTF2I Homo sapiens ENSG00000263001 D
Afo_R005310 Aptenodytes forsteri Afo_R005310 I
ENSPANG00000010876 Papio anubis ENSPANG00000010876 I
ENSPPYG00000017484 Pongo abelii ENSPPYG00000017484 I
ENSPSIG00000011811 Pelodiscus sinensis ENSPSIG00000011811 I
GTF2I Pan troglodytes ENSPTRG00000019293 I
GTF2I Pteropus vampyrus ENSPVAG00000005365 I
Gtf2i Rattus norvegicus ENSRNOG00000001479 I
GTF2I Sorex araneus ENSSARG00000011458 I
GTF2I Sus scrofa ENSSSCG00000007721 I
GTF2I Taeniopygia guttata ENSTGUG00000003714 I
GTF2I Tursiops truncatus ENSTTRG00000014454 I
GTF2I Vicugna pacos ENSVPAG00000008515 I
Aan_R007260 Calypte anna Aan_R007260 I
GTF2I Otolemur garnettii ENSOGAG00000029837 I
Alligator_sinensis_CCG003098.5 Alligator sinensis Alligator_sinensis_CCG003098.5 I
Cmyd_10014807 Chelonia mydas Cmyd_10014807 I
ENSBTAP00000012902-D1 Bos grunniens ENSBTAP00000012902-D1 I
ENSP00000322542 Macaca fascicularis ENSP00000322542 I
Gfo_R013538 Geospiza fortis Gfo_R013538 I
Myotis_brandtii_GTF2I_10014287 Myotis brandtii Myotis_brandtii_GTF2I_10014287 I
Pvit_17518 Pogona vitticeps Pvit_17518 I
Tal_R004165 Tyto alba Tal_R004165 I
gtf2i.S Xenopus laevis XB-GENE-1217444 I
XP_002932326 Xenopus tropicalis XP_002932326 I
ENSLACG00000018432 Latimeria chalumnae ENSLACG00000018432 I
ENSAPLG00000005397 Anas platyrhynchos ENSAPLG00000005397 I
GTF2I Bos taurus ENSBTAG00000009780 I
GTF2I Canis familiaris ENSCAFG00000011514 I
GTF2I Callithrix jacchus ENSCJAG00000016182 I
GTF2I Cavia porcellus ENSCPOG00000004071 I
ENSCSAG00000018227 Chlorocebus sabaeus ENSCSAG00000018227 I
ENSDNOG00000000823 Dasypus novemcinctus ENSDNOG00000000823 I
GTF2I Equus caballus ENSECAG00000020289 I
ENSFALG00000007065 Ficedula albicollis ENSFALG00000007065 I
GTF2I Felis catus ENSFCAG00000002617 I
GTF2I Gallus gallus ENSGALG00000021665 I
ENSAMEG00000015241 Ailuropoda melanoleuca ENSAMEG00000015241 I
GTF2I Loxodonta africana ENSLAFG00000003646 I
GTF2I Meleagris gallopavo ENSMGAG00000002373 I
GTF2I Macaca mulatta ENSMMUG00000006823 I
GTF2I Monodelphis domestica ENSMODG00000007022 I
ENSMPUG00000016156 Mustela putorius furo ENSMPUG00000016156 I
Gtf2i Mus musculus ENSMUSG00000060261 I
ENSNLEG00000008741 Nomascus leucogenys ENSNLEG00000008741 I
GTF2I Ornithorhynchus anatinus ENSOANG00000012919 I
ENSOARG00000011276 Ovis aries ENSOARG00000011276 I
GTF2I Oryctolagus cuniculus ENSOCUG00000002063 I